Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g02124 ATGGGATCCTTTGGCCATTTCTTCCAAAATGCAATGCCTTACATCGCAGTCATCTCCCTTCAATTCGGCTACGCTGGACTGAACATCCTATCTGCCATCGCCCTCAATGGTGGTATGAGTCACTACGTTCTTGTCGTCTACCGTCAGGTCTTTGCGACTGTGATCATGGCGCCCTTTGCTCTCATTCTCGAGAGGAAATTTAGACCAAAGATTACATTTAAGATTTTCATTCAGATATTCGTTCTTGCTCTTCTTGGGCCATTGCTTGACCAAAACTTATACTACATGGGGCTAAAAATGACATCTCCAACAATCGCTTGCGCCATAGTCAACATGCTTCCTTCGGTGACATTCGCTATGGCAGTCATTTGCAAGATAGAAAAGTTGGACTTGAAAAGAGTGAGATGTCGAGCGAAATTGTTGGGAACAATAGTGACCCTAGGTGGAGCCATGTTGATGACATTTTATAAAGGAAATGCCGTCAACTTTCTCGGCACAAAGCACGGCCGCCAACCGAACACACCATCCACGGCCGTGCTCAATCACCACAACCAGGGAGAGTATATCAAAGGCTCCATTTTGCTCATCATCTCCACTTTGGCTTGGGCAGCCTTCTTCATCCTCCAAACAATAACCTTGAGAAAATACACAGCCCATCTTTCTCTCACCACCTTGGTTTGCTTTCTGGGAACCCTTCAGGCCACTGTTGCCACCTTTGCCATAGAGCGTCGCCTCTCCGCCTGGGCCATCGGTTGGGATTGGAACCTTCTAGCATCAGCTTATGCAGGAATTGTGTCATCAGGGGTGGCATATTATGTTCAAGGTTTGGTAATGAAAACAAGAGGTCCAGTTTTTGTTACAGCTTTTGGTCCTATGGTAGTAGTGATTGTTGCCTTCATGGGTCATTTCATCTTGGCTGAAGAGATTTATGTTGGAGGGGTAATTGGATCAGTGGTGATTATAATAGGGTTATACTTTGTTTTGTGGGGAAAGTATAAGGAAAGCAGAGAGAAGAAGGAAGAAGTTATTGGAGAGATTATTGTTGAAGCAATAATGGAAGAAGGTGATCATCATGATCATCAATTGCCTATTGTAAATGAAGGTATTGAATTAGCAACTGATCAAAAGAAAGAGGGTTTGGCCATTACTATTCCATCCATGACTTCACCTAATAACATGGAAAAACAGGCCTCAAGACACCAATCAAACCAAATCAATAATTAA 1224 43.55 MGSFGHFFQNAMPYIAVISLQFGYAGLNILSAIALNGGMSHYVLVVYRQVFATVIMAPFALILERKFRPKITFKIFIQIFVLALLGPLLDQNLYYMGLKMTSPTIACAIVNMLPSVTFAMAVICKIEKLDLKRVRCRAKLLGTIVTLGGAMLMTFYKGNAVNFLGTKHGRQPNTPSTAVLNHHNQGEYIKGSILLIISTLAWAAFFILQTITLRKYTAHLSLTTLVCFLGTLQATVATFAIERRLSAWAIGWDWNLLASAYAGIVSSGVAYYVQGLVMKTRGPVFVTAFGPMVVVIVAFMGHFILAEEIYVGGVIGSVVIIIGLYFVLWGKYKESREKKEEVIGEIIVEAIMEEGDHHDHQLPIVNEGIELATDQKKEGLAITIPSMTSPNNMEKQASRHQSNQINN 407
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 28565022 28567653 - MELO3C009740.2.1 Cme04g02124 326385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g02124 407 Pfam EamA-like transporter family 190 328 IPR000620 GO:0016020|GO:0016021
Cme04g02124 407 Pfam EamA-like transporter family 13 154 IPR000620 GO:0016020|GO:0016021
Cme04g02124 407 PANTHER WAT1-RELATED PROTEIN 9 363 - -
Cme04g02124 407 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 156 - -
Cme04g02124 407 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 333 - -
Cme04g02124 407 MobiDBLite consensus disorder prediction 385 407 - -
Cme04g02124 407 PANTHER WAT1-RELATED PROTEIN 9 363 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g02124 Cme-Chr4:28565022 Cme10g00733 Cme-Chr10:4653085 4.42E-149 dispersed
Cme04g02124 Cme-Chr4:28565022 Cme04g02125 Cme-Chr4:28571020 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g02124 - - csv:101212451 636.721