Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g02125 ATGGGATTCTTAGAATGCATTGGCCGTTTCTTTCAAAATGCAAACCCATACATCGCAGTCATCTCCCTCCAATTCGGCTACGCCGGAATGAACATCATCTCCGTCGTCTCCCTCAACCGTGGTATGAGCCACTACGTCCTTGTCGTCTACCGTCATGCCTTTGCCACTGCCGTCATGGCACCCTTTGCTCTTGTTCTCGAGAGGAAAGTAAGACCTAAGATTACATGGAAGATTTTCATTCAGATGTTTGCTCTTGCTCTTCTTGGACCACTGATTGATCAAAACTTCTACTACGTGGGGTTGAAAATGACATCCCCAACTTTCTCTTGTGCGATAAGCAACATGCTCCCTGCAATGACATTCGTCATGGCAGTCATTTGCAGGATGGAGAAGTTGGATTTGAAAAGAGTGAGATGTCAAGCGAAGTTGTTTGGAACGATAGTGACGGTGGTGGGAGCCATGTTGATGACATTTTACAAAGGAAGTGTCATCAACATCTTCGGGACCGGGCACAGCCACCAACCGTCATCGGCCGACGCAGCTGCAGTCAACCACCACCACGACGGAGAGTTCATCAAAGGCTCCATATTGCTCATCATCGCCACTCTGGCTTGGGCAGCCTTCTTCATTCTCCAAGTAATAACCTTGAGAAAATACACAGCCCATCTTTCTCTCACCACCATGGTTTGCTTTTTGGGAACCCTTCAAGCCATTATCGTCACCCTCGCCATGGAGCACCGCCCTGGTGCCTGGGCCATCGGCTGGGACATGAACCTTCTTGCCGCTGCATATGCGGGGATCGTGACATCAGGGGTGGCATATTATGTTCAAGGTTTGGTTATGAAGACAAAAGGGCCAGTTTTTGTTACAGCTTTCAGTCCATTGATGATGGTTATTGTTGCTTTCATGGGATCTCTCATCTTGGCTGAAAAGATTTATGTTGGAGGGATAATTGGAGCAGTGTTGATTGTAATAGGATTATACTCTGTTTTGTGGGGAAAATACAAGGAAAGCAAAGAGAAGGAAAGTAATGGAGATATTGTTGAAGCAATGAAAGGTGGAGATGAATTGCCTATAACAAATGAAGGCAATGAAGAAGCAATAATTGATCATCAAAAGAAAGAGGGTTTGGCCATTACTATTCCACCCATCGAAGCACTTAGCATGGAGAAGAGGCAGCTTCAAGACACACTCGCTAATTAA 1203 45.97 MGFLECIGRFFQNANPYIAVISLQFGYAGMNIISVVSLNRGMSHYVLVVYRHAFATAVMAPFALVLERKVRPKITWKIFIQMFALALLGPLIDQNFYYVGLKMTSPTFSCAISNMLPAMTFVMAVICRMEKLDLKRVRCQAKLFGTIVTVVGAMLMTFYKGSVINIFGTGHSHQPSSADAAAVNHHHDGEFIKGSILLIIATLAWAAFFILQVITLRKYTAHLSLTTMVCFLGTLQAIIVTLAMEHRPGAWAIGWDMNLLAAAYAGIVTSGVAYYVQGLVMKTKGPVFVTAFSPLMMVIVAFMGSLILAEKIYVGGIIGAVLIVIGLYSVLWGKYKESKEKESNGDIVEAMKGGDELPITNEGNEEAIIDHQKKEGLAITIPPIEALSMEKRQLQDTLAN 400
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 28571020 28573875 - MELO3C009739.2.1 Cme04g02125 326386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g02125 400 PANTHER WAT1-RELATED PROTEIN 11 367 IPR030184 GO:0016021|GO:0022857
Cme04g02125 400 PANTHER WAT1-RELATED PROTEIN 11 367 - -
Cme04g02125 400 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020|GO:0016021
Cme04g02125 400 Pfam EamA-like transporter family 19 157 IPR000620 GO:0016020|GO:0016021
Cme04g02125 400 Coils Coil 384 400 - -
Cme04g02125 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 159 - -
Cme04g02125 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 232 335 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme04g02125 Cme08g01439 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01914 Cme-Chr3:27258768 Cme04g02125 Cme-Chr4:28571020 1.94E-78 dispersed
Cme04g02125 Cme-Chr4:28571020 Cme10g00733 Cme-Chr10:4653085 7.96E-170 dispersed
Cme11g00081 Cme-Chr11:651255 Cme04g02125 Cme-Chr4:28571020 1.50E-72 dispersed
Cme11g00082 Cme-Chr11:656276 Cme04g02125 Cme-Chr4:28571020 1.67E-74 dispersed
Cme04g02124 Cme-Chr4:28565022 Cme04g02125 Cme-Chr4:28571020 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g02125 - - csv:101211966 725.317