Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g02126 ATGGATATCTCTGTTCTATCACTAACACCCTTCATTTTCCTCACTTTTTTCTCTTTTTCCATTTACTTTCTCTTCTTTACTTCAACAAAATCAAAATCCAAACCCCAACAAGGCTTCAAACACTTCCCCTTCGTCGGAACCTTGCCCTTATTCTTACTGAACCGCCACCGCTTTCTCGACTGGTCAACAGAGGTTTTGAGAAACTGCCGGACGAACACGGCGGTGTTCAAACGGCCAGGGAAAGTCCACGGCGTAATCACCGCAAACCCACTTGTTGTCGAGCATATACTAAAGACCCAATTTGAGAATTACCCAAAAGGAGAAAGATTCATTTCGCTTTTGGAAGATTTCTTGGGCAGAGGAATTTTTAACTCCGACGGCGAAATTTGGAAAGTACAGAGGAAGACAGCGAGTTATGAATTCAATACGAAATCGTTGAGAAATTTTGTTATGGAGAATGTTAGAGTTGAGATTCAGAGTAGGTTGTTGCCTATTTTCGGAAAAGCTTGTGAAACGGAACGGATTTTGGATCTACAGGATGTTTTGGAACGGTTTGCGTTTGATAATGTTTGTAAATTGGCTTTTAATTATGACCCTGCTTGTCTCGGCGGCGATGGCACTGCCGCCACTGAGTTTATGCGTGCTTTTGAGCACGCCGCCACTCTCAGTTCTGGCAGGTTCATGTATGCTTTCCCAGGTTCGTACAAAGTGAAGAAATTTTTTAACATAGGATCAGAAAAAACCCTAAAGGAATCAATAGCCGTAGTTCACAAATTTGCTGAAGACATCATCCACTCAAGGTTAGAAGAAAAGAAGACAACCCAAATAGAAAACGATCAAGATTTATTATCTCGGTTCATGGGCGACCAAAACAATTCTCCACAATTCCTTCGAGACATAATCATAAGCTTCATCCTCGCCGGTCGAGATACCACTTCATCCGCTCTAACATGGTTCTTCTGGATCTTATCCTCTCGACCCGACGTCGAACAAAAAATCCTCGCAGAACTCGAAACAATCCGAACAAAAGCACATAAGGAAATTGGAGAAATGTATAGCTTCGACGAACTGCGTGACATGCACTATCTACAAGCAGCTTTATCAGAGACTCTCCGTCTATACCCTCCGGTGCCCGTCGATACAAAAGCATGTCGAAACGACGACGTCTTACCCGATGGGACGTTTATTGGGAAGAGTTGGTTTGTGACGTACCATACGTATGCAATGGGGAGAATGGAGAGCATATGGGGGAAGGATTATGGAGAATTTTCGCCAGAGAGGTGGTTGGAGAATGGGGTTTGTAAGACAGAGAGTCCGTTTCGGTTCCCGATATTTCACGCAGGGCCGAGGATGTGTTTGGGGAAGGACATGGCTTATATTCAGATGAAGTCCATAGCTGCGGCTGTGATTGAGAAGTTTGAAGTGGAGATGGTGGAGAAGAAGAAGAGTCCAAAGCATTTGTTGTCGTTGACATTGAGGATGGAGAATGGATTACAAGTGATGATTAAAAGGAGAGATAGAGGTTTGTCCATCTGA 1536 43.68 MDISVLSLTPFIFLTFFSFSIYFLFFTSTKSKSKPQQGFKHFPFVGTLPLFLLNRHRFLDWSTEVLRNCRTNTAVFKRPGKVHGVITANPLVVEHILKTQFENYPKGERFISLLEDFLGRGIFNSDGEIWKVQRKTASYEFNTKSLRNFVMENVRVEIQSRLLPIFGKACETERILDLQDVLERFAFDNVCKLAFNYDPACLGGDGTAATEFMRAFEHAATLSSGRFMYAFPGSYKVKKFFNIGSEKTLKESIAVVHKFAEDIIHSRLEEKKTTQIENDQDLLSRFMGDQNNSPQFLRDIIISFILAGRDTTSSALTWFFWILSSRPDVEQKILAELETIRTKAHKEIGEMYSFDELRDMHYLQAALSETLRLYPPVPVDTKACRNDDVLPDGTFIGKSWFVTYHTYAMGRMESIWGKDYGEFSPERWLENGVCKTESPFRFPIFHAGPRMCLGKDMAYIQMKSIAAAVIEKFEVEMVEKKKSPKHLLSLTLRMENGLQVMIKRRDRGLSI 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 28599991 28602083 + MELO3C030719.2.1 Cme04g02126 326387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g02126 511 PANTHER CYTOCHROME P450 FAMILY PROTEIN-RELATED 21 499 - -
Cme04g02126 511 SUPERFAMILY Cytochrome P450 33 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02126 511 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02126 511 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02126 511 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02126 511 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02126 511 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02126 511 PANTHER CYTOCHROME P450 21 499 - -
Cme04g02126 511 Gene3D Cytochrome P450 22 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02126 511 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02126 511 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02126 511 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02126 511 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02126 511 Pfam Cytochrome P450 75 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02126 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g02126 Cme-Chr4:28599991 Cme06g01814 Cme-Chr6:21203204 4.53E-131 dispersed
Cme06g00237 Cme-Chr6:1406120 Cme04g02126 Cme-Chr4:28599991 2.19E-104 dispersed
Cme04g02126 Cme-Chr4:28599991 Cme04g02128 Cme-Chr4:28605370 9.02E-161 proximal
Cme04g02126 Cme-Chr4:28599991 Cme04g02127 Cme-Chr4:28604256 1.10E-139 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g02126 - - csv:101211731 959.903