Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g02128 ATGGGCGACCAAAACAATTCTCCACAATTCCTTCGAGACATAATCATAAGCTTCATCCTCGCCGGTTCTGATACCACTTCATCGGCTCTAACATGGTTCTTCTGGATCTTATCCTCTCGACCCGACGTCGAACAAAAAATATTCGCAGAACTTGAAACAATTCGAAAAAAAGCACATAAGGAAATTGGAGAAATGTATAGCTTCGACGAACTGCGTGACATGCACTATCTACAAGCAGCTTTATCAGAGACTCTCCGTCTATACCCACCGGTGCCAGTCGATTCAAGAACATGTCGAAACGACGACGTCTTACCCGATGGGACGTTTATTGGGAAGAGTTGGCTTGTGACGTACCATACGCATGCAATGGGGAGAATGGAGAGCATATGGGGGAAGGATTATGGAGAATTTTCGCCAGAGAGGTGGTTGAAGAATGGGGTTTGTAAGACAGAGAGTCCGTTTCGGTTCCTGATATTTCACGCGGGACCGAGGATGTGTTTGGGGAAGGACATGGCTTATATTCAGATGAAGTCCATAGCTGCGGCTGTGATTGAGAAGTTTGAAGTGGAGATGGTGGAGAAGAAGAAGAGTCCAAAGCATTTGTTGTCGTTGACATTGAGGATGGAGAATGGTTTACAAGTGATGATTAAAAAGAGAGATAGGGGTTTGTCCATCTGA 678 45.13 MGDQNNSPQFLRDIIISFILAGSDTTSSALTWFFWILSSRPDVEQKIFAELETIRKKAHKEIGEMYSFDELRDMHYLQAALSETLRLYPPVPVDSRTCRNDDVLPDGTFIGKSWLVTYHTHAMGRMESIWGKDYGEFSPERWLKNGVCKTESPFRFLIFHAGPRMCLGKDMAYIQMKSIAAAVIEKFEVEMVEKKKSPKHLLSLTLRMENGLQVMIKKRDRGLSI 225
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 28605370 28606240 + MELO3C009737.2.1 Cme04g02128 326389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g02128 225 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 159 168 IPR017972 GO:0005506|GO:0016705
Cme04g02128 225 SUPERFAMILY Cytochrome P450 5 219 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02128 225 PANTHER CYTOCHROME P450 94B3-LIKE 3 217 - -
Cme04g02128 225 Pfam Cytochrome P450 11 203 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02128 225 Gene3D Cytochrome P450 1 219 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02128 225 PRINTS E-class P450 group I signature 78 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02128 225 PRINTS E-class P450 group I signature 156 166 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02128 225 PRINTS E-class P450 group I signature 10 27 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02128 225 PRINTS E-class P450 group I signature 166 189 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02128 225 PRINTS E-class P450 group I signature 30 56 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02128 225 PRINTS P450 superfamily signature 79 90 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02128 225 PRINTS P450 superfamily signature 21 38 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02128 225 PRINTS P450 superfamily signature 157 166 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02128 225 PRINTS P450 superfamily signature 166 177 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02128 225 PANTHER CYTOCHROME P450 3 217 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g02128 Cme-Chr4:28605370 Cme02g02059 Cme-Chr2:26588824 8.38E-69 dispersed
Cme04g02126 Cme-Chr4:28599991 Cme04g02128 Cme-Chr4:28605370 9.02E-161 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g02128 - - csv:101211731 418.698