Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g02145 ATGTGTCAATGTCCAATCAAAGTTGATTCACGGCCACCACATTGGAATCCGACAACATCGTCAACGGGATTATTGTCGTTCATACATTACTACGGTAATCTTTGTCCAATCAAAATCAAAGCCACCAATATTCCTTCATTTACCCTTCTCCTCACTCTTCATCGCTTCAAATTGATCAATCCGAGTGAAGAAACGGGTCGTAGGGAAGAACCCCAGAAGATTTCCTTTTCAACGATGTCTTCTGGGGCGGCTCGATTGCTTGTGTTGGATTTTGCCCTCTCTTTTATGTGGTTATGGTCGGGGGTTTTGGTTAAGATCTTTGTTTTTGGGATATTGGGGTTCGGAGATGATCTGGTTAGCGAGGTTGTCAAGGCTTCCTTTTCGATTCTCAACATGTTCTTCTTTGCGTTCCTGGTGAAAATTTCAAATGGGTCTGCTTATAATCCTCTTACCATCTTATCTGCTGCTTTTTCTGGGGATTTCAGTAGATTTCTTTTCGTTGTTGGTGCCAGAATCCCTGCTCAGGTAATGGGAGCTATTACTGCTGTTAGGCTGATTATCCATACATTTCCCGAAGCAGGACGAGGGCCTCGTTTGACTGTTGGCATCCATCACGGCGCTTTGACGGAAGGATTGTTAACATTTGCCATTGTATCTATCTCACTTGGACTTTCAAGGAAAATAGTTGGAAATTTCTTCATGAAGACTTGGATCTCAAGTTTATCCAAGTTAACTCTTCATATCCTCGGTTCCGACTTAACTGGTGGCTGTATGAACCCCGCATCTGTAATGGGATGGGCATATGCTCGTGGGGAACATATAACAACAGAACATATTCTTGTATACTGGATCGCTCCGATTCAAGGAACCATAGCAGCTATATTGACATTCAAGTTACTATTTCGACAACCGAAAGAAGAGAAAGTAAATATGAAGAAGAAATCAGAATGA 951 42.17 MCQCPIKVDSRPPHWNPTTSSTGLLSFIHYYGNLCPIKIKATNIPSFTLLLTLHRFKLINPSEETGRREEPQKISFSTMSSGAARLLVLDFALSFMWLWSGVLVKIFVFGILGFGDDLVSEVVKASFSILNMFFFAFLVKISNGSAYNPLTILSAAFSGDFSRFLFVVGARIPAQVMGAITAVRLIIHTFPEAGRGPRLTVGIHHGALTEGLLTFAIVSISLGLSRKIVGNFFMKTWISSLSKLTLHILGSDLTGGCMNPASVMGWAYARGEHITTEHILVYWIAPIQGTIAAILTFKLLFRQPKEEKVNMKKKSE 316
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 28747210 28750997 - MELO3C009719.2.1 Cme04g02145 326406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g02145 316 PRINTS Major intrinsic protein family signature 85 104 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cme04g02145 316 PRINTS Major intrinsic protein family signature 167 186 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cme04g02145 316 PRINTS Major intrinsic protein family signature 209 227 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cme04g02145 316 PRINTS Major intrinsic protein family signature 240 262 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cme04g02145 316 PRINTS Major intrinsic protein family signature 280 300 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cme04g02145 316 PANTHER AQUAPORIN SIP2-1-RELATED 81 316 - -
Cme04g02145 316 SUPERFAMILY Aquaporin-like 83 314 IPR023271 -
Cme04g02145 316 Gene3D Glycerol uptake facilitator protein. 79 315 IPR023271 -
Cme04g02145 316 PANTHER AQUAPORIN SIP2-1-RELATED 81 316 IPR044226 GO:0015267
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g02145 Cme-Chr4:28747210 Cme08g02008 Cme-Chr8:25274615 3.98E-22 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g02145 K09875 - csv:101214379 456.832