Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme04g02145 | ATGTGTCAATGTCCAATCAAAGTTGATTCACGGCCACCACATTGGAATCCGACAACATCGTCAACGGGATTATTGTCGTTCATACATTACTACGGTAATCTTTGTCCAATCAAAATCAAAGCCACCAATATTCCTTCATTTACCCTTCTCCTCACTCTTCATCGCTTCAAATTGATCAATCCGAGTGAAGAAACGGGTCGTAGGGAAGAACCCCAGAAGATTTCCTTTTCAACGATGTCTTCTGGGGCGGCTCGATTGCTTGTGTTGGATTTTGCCCTCTCTTTTATGTGGTTATGGTCGGGGGTTTTGGTTAAGATCTTTGTTTTTGGGATATTGGGGTTCGGAGATGATCTGGTTAGCGAGGTTGTCAAGGCTTCCTTTTCGATTCTCAACATGTTCTTCTTTGCGTTCCTGGTGAAAATTTCAAATGGGTCTGCTTATAATCCTCTTACCATCTTATCTGCTGCTTTTTCTGGGGATTTCAGTAGATTTCTTTTCGTTGTTGGTGCCAGAATCCCTGCTCAGGTAATGGGAGCTATTACTGCTGTTAGGCTGATTATCCATACATTTCCCGAAGCAGGACGAGGGCCTCGTTTGACTGTTGGCATCCATCACGGCGCTTTGACGGAAGGATTGTTAACATTTGCCATTGTATCTATCTCACTTGGACTTTCAAGGAAAATAGTTGGAAATTTCTTCATGAAGACTTGGATCTCAAGTTTATCCAAGTTAACTCTTCATATCCTCGGTTCCGACTTAACTGGTGGCTGTATGAACCCCGCATCTGTAATGGGATGGGCATATGCTCGTGGGGAACATATAACAACAGAACATATTCTTGTATACTGGATCGCTCCGATTCAAGGAACCATAGCAGCTATATTGACATTCAAGTTACTATTTCGACAACCGAAAGAAGAGAAAGTAAATATGAAGAAGAAATCAGAATGA | 951 | 42.17 | MCQCPIKVDSRPPHWNPTTSSTGLLSFIHYYGNLCPIKIKATNIPSFTLLLTLHRFKLINPSEETGRREEPQKISFSTMSSGAARLLVLDFALSFMWLWSGVLVKIFVFGILGFGDDLVSEVVKASFSILNMFFFAFLVKISNGSAYNPLTILSAAFSGDFSRFLFVVGARIPAQVMGAITAVRLIIHTFPEAGRGPRLTVGIHHGALTEGLLTFAIVSISLGLSRKIVGNFFMKTWISSLSKLTLHILGSDLTGGCMNPASVMGWAYARGEHITTEHILVYWIAPIQGTIAAILTFKLLFRQPKEEKVNMKKKSE | 316 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 28747210 | 28750997 | - | MELO3C009719.2.1 | Cme04g02145 | 326406 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme04g02145 | 316 | PRINTS | Major intrinsic protein family signature | 85 | 104 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme04g02145 | 316 | PRINTS | Major intrinsic protein family signature | 167 | 186 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme04g02145 | 316 | PRINTS | Major intrinsic protein family signature | 209 | 227 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme04g02145 | 316 | PRINTS | Major intrinsic protein family signature | 240 | 262 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme04g02145 | 316 | PRINTS | Major intrinsic protein family signature | 280 | 300 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme04g02145 | 316 | PANTHER | AQUAPORIN SIP2-1-RELATED | 81 | 316 | - | - | |
Cme04g02145 | 316 | SUPERFAMILY | Aquaporin-like | 83 | 314 | IPR023271 | - | |
Cme04g02145 | 316 | Gene3D | Glycerol uptake facilitator protein. | 79 | 315 | IPR023271 | - | |
Cme04g02145 | 316 | PANTHER | AQUAPORIN SIP2-1-RELATED | 81 | 316 | IPR044226 | GO:0015267 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme04g02145 | Cme-Chr4:28747210 | Cme08g02008 | Cme-Chr8:25274615 | 3.98E-22 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme04g02145 | K09875 | - | csv:101214379 | 456.832 |