Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g02213 ATGGAGATTAAAGTAGGGACTGTAGGTGGATCCAGTACAATCGGGCGTCAATCGGATGATACTGGACTTGAATCGCTTCAATTCTGTGAAGAAATTCAGGGGTTGATGACTATTCCGGCGGAAAATGCTAGCTCCTTCACCGCACTTCTGGAACTCCCGGCGACGCAGGCTTTAGAGCTACTTCACTCGCCGGATTCCGCGGCGGCGGCGGTTGTGAACGATGATTCCGTTCATCACTGTATCAAAGACGTTCCGAAACCCTACTTTAGTGCCTTCAACTGCAATTTGACCTTTCCGACGAACTCGGGTCTAATTGAACGTGTTACCAAGCTCTCGATTTTGGCTAAAGAGCATTCGCCGGAGACGACAAGCTCAGTGCCGTTGAATTCGAGTGTGAATTTTGAGAAGGTGAAGAACGAGCCCACAACTGACACCGATTCGAACCCTAATCCCTTGCAGACTTTAATCTCCGATCCGAAGGTGGAGAACACGAACCAGAGATCGGCGAAGAGGAAGGAACGCGAGAAAAAGGGAAGAGGGTCAACAAAGAAGAGCAAGAATGAAAGCAACGAGGATGCAGAAAAGCTTCCTTATGTTCATGTCCGAGCTCGCCGTGGTCAAGCGACAGACAGCCATAGCCTAGCAGAGCGAGCAAGGAGAGAGAAAATCAATGCTCGGATGAAGCTACTTCAAGAACTGGTCCCTGGATGCAATAAGATCTCAGGCACAGCTCTAGTGTTGGATGAAATCATCAACCATGTACAATCACTGCAGCGTCAAGTGGAGGTCAGAATCTAA 798 49.0 MEIKVGTVGGSSTIGRQSDDTGLESLQFCEEIQGLMTIPAENASSFTALLELPATQALELLHSPDSAAAAVVNDDSVHHCIKDVPKPYFSAFNCNLTFPTNSGLIERVTKLSILAKEHSPETTSSVPLNSSVNFEKVKNEPTTDTDSNPNPLQTLISDPKVENTNQRSAKRKEREKKGRGSTKKSKNESNEDAEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEVRI 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 29332493 29337790 - MELO3C009653.2.1 Cme04g02213 326474

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g02213 265 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 205 263 IPR036638 GO:0046983
Cme04g02213 265 SMART finulus 213 263 IPR011598 GO:0046983
Cme04g02213 265 MobiDBLite consensus disorder prediction 180 195 - -
Cme04g02213 265 MobiDBLite consensus disorder prediction 138 195 - -
Cme04g02213 265 MobiDBLite consensus disorder prediction 138 163 - -
Cme04g02213 265 Pfam Helix-loop-helix DNA-binding domain 211 258 IPR011598 GO:0046983
Cme04g02213 265 Gene3D - 204 264 IPR036638 GO:0046983
Cme04g02213 265 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 207 257 IPR011598 GO:0046983
Cme04g02213 265 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 17 262 IPR024097 GO:0006355
Cme04g02213 265 PANTHER TRANSCRIPTION FACTOR BHLH60 17 262 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g02213 - - - csv:101205014 489.189
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g02213 Cme-Chr4:29332493 Cme06g00870 Cme-Chr6:5978443 3.46E-33 dispersed
Cme04g02213 Cme-Chr4:29332493 Cme07g00258 Cme-Chr7:1678327 2.34E-34 transposed
Cme04g02213 Cme-Chr4:29332493 Cme11g00114 Cme-Chr11:1054206 1.32E-34 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi8g1390 . Blo12g00594 . Bda03g00603 . Bpe03g01136 Bma04g01514 Bma10g00270 Cmo06g00075 Cmo14g00443 . . . . . . . . . . . . . . . . . . . . . Cone3ag0076 . . . . . . Cme04g02213 . Blo09g00420 . Bda05g01068 . . . Bma04g00462 Sed02g0327 . . Cma06g00083 Cma14g00438 Car06g00071 Car14g00403 Cpe03g00389 . Bhi11g02669 Tan08g1454 Cmetu04g2272 . . . . Cla10g01647 Cam10g1693 Cec10g1745 Cco10g1708 Clacu10g1713 Cmu10g2465 Cre10g1844 Lsi03g01710 Csa03g03604 Chy04g01755 .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cme06g00505 . 49 223 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G14410 58.3 8.8e-40 161.0
Cme04g00808 . 1 234 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 64.6 3.0e-57 218.8
Cme04g00805 . 1 209 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 52.1 1.1e-51 200.3
Cme11g00758 . 5 249 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 54.4 2.5e-43 172.6
Cme12g01447 . 1 234 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 50.2 2.5e-43 172.6
Cme04g01820 . 61 241 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G41130 63.3 3.8e-58 221.9
Cme08g00928 . 46 298 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 57.4 4.2e-46 182.2
Cme06g02003 . 1 109 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 76.1 1.1e-40 164.5
Cme07g01839 . 169 410 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G43140 54.8 1.6e-53 206.8
Cme12g01565 . 171 292 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 66.7 5.3e-42 168.3
Cme11g02089 . 40 194 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 59.4 2.1e-42 169.5
Cme06g00797 . 41 196 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 54.5 2.1e-39 159.5
Cme11g02089 . 38 197 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 62.1 8.6e-46 180.6
Cme06g00797 . 41 199 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 51.5 1.3e-38 156.8
Cme07g01937 . 26 170 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 58.6 2.9e-43 171.8
Cme07g01937 . 24 157 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 68.1 1.2e-41 166.4
Cme08g00583 . 129 256 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 76.5 2.8e-41 166.4
Cme01g00155 . 169 337 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 57.4 4.8e-45 178.7
Cme11g01844 . 9 306 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 51.9 6.4e-55 211.5
Cme10g00294 . 64 352 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 58.1 1.6e-73 273.5
Cme05g00742 . 91 302 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 65.3 3.3e-66 249.2
Cme04g01820 . 70 241 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 51.6 2.0e-39 160.2
Cme03g01315 . 24 256 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 55.1 5.6e-52 201.8
Cme02g01919 . 19 235 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 53.1 6.2e-43 171.8
Cme06g00870 . 244 435 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 50.5 4.6e-38 155.6
Cme06g00505 . 49 218 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23210 59.1 1.5e-37 153.7
Cme02g01617 . 21 212 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 60.7 2.3e-51 199.1
Cme05g01277 . 1 216 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 53.0 1.7e-49 193.0
Cme07g00345 . 62 261 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 55.0 2.9e-44 175.6
Cme11g00295 . 44 164 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 71.3 8.7e-41 164.1
Cme03g02055 . 89 190 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 75.5 1.3e-36 150.2
Cme08g01078 . 70 169 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00120 76.0 1.1e-36 150.2
Cme05g00359 . 1 151 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 57.9 9.0e-46 181.8
Cme08g01078 . 75 171 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09750 88.7 9.9e-42 167.2
Cme12g01876 CCT,ECH 132 235 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G18400 80.8 6.4e-42 167.9
Cme06g00643 . 1 184 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 66.2 3.8e-56 214.9
Cme07g00258 . 215 386 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 53.9 2.5e-45 180.3
Cme04g00117 CCT 108 720 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G46760 52.1 5.5e-148 521.5
Cme06g02473 CCT 66 650 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G46760 52.8 3.0e-146 515.8
Cme12g01876 CCT,ECH 115 257 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 70.0 2.0e-46 183.0
Cme07g00293 . 53 148 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27740 81.3 1.0e-37 154.1
Cme01g02003 . 72 312 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 78.8 2.2e-95 345.5
Cme02g00158 . 124 383 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 59.4 7.1e-65 244.2
Cme02g01076 . 152 360 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 55.0 1.1e-44 177.2
Cme04g00117 CCT 35 720 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 54.4 3.4e-172 602.1
Cme06g02473 CCT 1 650 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 53.9 1.0e-168 590.5
Cme04g02213 . 1 262 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 55.4 3.4e-58 222.6
Cme08g00704 . 146 340 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 63.3 4.6e-61 231.9
Cme03g01779 CCT 166 340 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 66.1 4.5e-56 215.3
Cme04g00212 CCT 164 310 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 65.3 1.9e-46 183.3
Cme10g00327 . 362 458 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 80.4 9.9e-38 154.8
Cme06g00870 . 333 439 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 74.3 2.0e-38 156.8
Cme11g00114 . 176 284 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 69.7 1.7e-37 153.7
Cme01g01389 . 58 167 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 70.7 2.2e-37 153.3
Cme02g01076 . 199 419 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 63.8 9.2e-65 243.8
Cme02g00158 . 207 374 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 62.5 2.5e-46 182.6
Cme01g02003 . 137 293 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 63.8 1.5e-43 173.3
Cme02g01076 . 201 420 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 60.3 1.0e-56 217.6
Cme01g02003 . 148 311 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 59.8 4.9e-43 172.2
Cme02g00158 . 219 364 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 63.7 1.9e-42 170.2
Cme01g02003 . 1 312 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 61.0 4.7e-88 321.6
Cme02g00158 . 200 383 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 63.7 6.6e-58 221.5
Cme02g01076 . 197 360 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 56.8 2.5e-41 166.4
Cme10g00327 . 353 482 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 70.0 1.1e-42 171.0
Cme06g00870 . 329 499 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G26260 54.7 2.3e-38 156.8
Cme10g00327 . 356 538 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 51.1 3.8e-38 156.0
Cme07g00258 . 223 383 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 56.5 1.9e-37 153.7
Cme10g00327 . 356 506 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 59.7 6.2e-38 155.6
Cme02g01919 . 1 276 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 56.5 1.8e-69 259.6
Cme09g00012 . 23 204 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G35460 54.2 2.3e-46 182.6
Cme09g00012 . 23 227 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09180 59.3 6.8e-58 221.1
Cme02g01076 . 165 373 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 63.8 3.8e-57 218.8
Cme02g00158 . 207 364 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 59.9 1.7e-44 176.8
Cme01g02003 . 130 307 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 54.0 4.1e-43 172.2
Cme09g00932 . 127 276 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G66470 67.1 5.0e-41 165.2
Cme07g02178 CCT,ECH 198 348 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 58.3 1.8e-39 160.2
Cme01g00118 CCT,ECH 211 325 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 68.0 5.0e-37 152.1
Cme07g00293 . 57 147 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 77.9 1.9e-36 150.2
Cme01g00118 CCT,ECH 235 325 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 90.1 4.3e-39 159.1
Cme07g02178 CCT,ECH 259 345 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 93.1 4.3e-39 159.1
Cme07g00293 . 57 140 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 94.0 2.8e-38 156.4
Cme09g00932 . 65 280 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G37800 50.6 6.1e-42 168.3
Cme07g00345 . 151 246 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 92.7 9.2e-43 170.6
Cme11g00295 . 70 164 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 86.3 1.1e-40 163.7
Cme03g02055 . 103 190 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 87.5 4.4e-37 151.8
Cme04g00128 . 91 286 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G22490 53.3 6.5e-42 168.3
Cme05g01680 CCT 103 287 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 54.1 1.6e-45 180.3
Cme06g00385 . 57 378 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G24140 60.5 2.5e-96 349.4
Cme04g00117 CCT 108 720 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G46760 52.1 5.5e-148 521.5
Cme06g02473 CCT 66 650 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G46760 52.8 3.0e-146 515.8
Cme04g00117 CCT 35 720 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 54.4 3.4e-172 602.1
Cme06g02473 CCT 1 650 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 53.9 1.0e-168 590.5
Cme01g02003 . 1 312 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 61.0 4.7e-88 321.6
Cme02g00158 . 200 383 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 63.7 6.6e-58 221.5
Cme02g01076 . 197 360 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 56.8 2.5e-41 166.4
Cme08g00583 . 129 256 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 76.5 2.8e-41 166.4
Cme01g00155 . 169 337 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 57.4 4.8e-45 178.7
Cme11g01844 . 9 306 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 51.9 6.4e-55 211.5
Cme10g00294 . 64 352 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 58.1 1.6e-73 273.5
Cme05g00742 . 91 302 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 65.3 3.3e-66 249.2
Cme04g01820 . 70 241 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 51.6 2.0e-39 160.2
Cme03g01315 . 24 256 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 55.1 5.6e-52 201.8
Cme02g01919 . 19 235 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 53.1 6.2e-43 171.8
Cme06g00870 . 244 435 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 50.5 4.6e-38 155.6
Cme06g00505 . 49 218 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23210 59.1 1.5e-37 153.7
Cme02g01617 . 21 212 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 60.7 2.3e-51 199.1
Cme05g01277 . 1 216 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 53.0 1.7e-49 193.0
Cme07g00345 . 62 261 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 55.0 2.9e-44 175.6
Cme11g00295 . 44 164 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 71.3 8.7e-41 164.1
Cme03g02055 . 89 190 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 75.5 1.3e-36 150.2
Cme08g01078 . 70 169 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00120 76.0 1.1e-36 150.2
Cme05g00359 . 1 151 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 57.9 9.0e-46 181.8
Cme08g01078 . 75 171 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09750 88.7 9.9e-42 167.2
Cme12g01876 CCT,ECH 132 235 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G18400 80.8 6.4e-42 167.9
Cme06g00643 . 1 184 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 66.2 3.8e-56 214.9
Cme07g00258 . 215 386 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 53.9 2.5e-45 180.3
Cme12g01876 CCT,ECH 115 257 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 70.0 2.0e-46 183.0
Cme07g00293 . 53 148 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27740 81.3 1.0e-37 154.1
Cme01g02003 . 72 312 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 78.8 2.2e-95 345.5
Cme02g00158 . 124 383 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 59.4 7.1e-65 244.2
Cme02g01076 . 152 360 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 55.0 1.1e-44 177.2
Cme04g02213 . 1 262 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 55.4 3.4e-58 222.6
Cme08g00704 . 146 340 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 63.3 4.6e-61 231.9
Cme03g01779 CCT 166 340 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 66.1 4.5e-56 215.3
Cme04g00212 CCT 164 310 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 65.3 1.9e-46 183.3
Cme10g00327 . 362 458 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 80.4 9.9e-38 154.8
Cme06g00870 . 333 439 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 74.3 2.0e-38 156.8
Cme11g00114 . 176 284 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 69.7 1.7e-37 153.7
Cme01g01389 . 58 167 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 70.7 2.2e-37 153.3
Cme02g01076 . 199 419 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 63.8 9.2e-65 243.8
Cme02g00158 . 207 374 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 62.5 2.5e-46 182.6
Cme01g02003 . 137 293 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 63.8 1.5e-43 173.3
Cme02g01076 . 201 420 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 60.3 1.0e-56 217.6
Cme01g02003 . 148 311 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 59.8 4.9e-43 172.2
Cme02g00158 . 219 364 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 63.7 1.9e-42 170.2
Cme10g00327 . 353 482 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 70.0 1.1e-42 171.0
Cme06g00870 . 329 499 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G26260 54.7 2.3e-38 156.8
Cme10g00327 . 356 538 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 51.1 3.8e-38 156.0
Cme07g00258 . 223 383 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 56.5 1.9e-37 153.7
Cme10g00327 . 356 506 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 59.7 6.2e-38 155.6
Cme02g01919 . 1 276 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 56.5 1.8e-69 259.6
Cme09g00012 . 23 204 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G35460 54.2 2.3e-46 182.6
Cme09g00012 . 23 227 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09180 59.3 6.8e-58 221.1
Cme02g01076 . 165 373 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 63.8 3.8e-57 218.8
Cme02g00158 . 207 364 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 59.9 1.7e-44 176.8
Cme01g02003 . 130 307 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 54.0 4.1e-43 172.2
Cme09g00932 . 127 276 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G66470 67.1 5.0e-41 165.2
Cme07g02178 CCT,ECH 198 348 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 58.3 1.8e-39 160.2
Cme01g00118 CCT,ECH 211 325 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 68.0 5.0e-37 152.1
Cme07g00293 . 57 147 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 77.9 1.9e-36 150.2
Cme01g00118 CCT,ECH 235 325 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 90.1 4.3e-39 159.1
Cme07g02178 CCT,ECH 259 345 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 93.1 4.3e-39 159.1
Cme07g00293 . 57 140 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 94.0 2.8e-38 156.4
Cme09g00932 . 65 280 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G37800 50.6 6.1e-42 168.3
Cme07g00345 . 151 246 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 92.7 9.2e-43 170.6
Cme11g00295 . 70 164 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 86.3 1.1e-40 163.7
Cme03g02055 . 103 190 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 87.5 4.4e-37 151.8
Cme04g00128 . 91 286 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G22490 53.3 6.5e-42 168.3
Cme05g01680 CCT 103 287 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 54.1 1.6e-45 180.3
Cme06g00385 . 57 378 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G24140 60.5 2.5e-96 349.4
Cme06g00505 . 49 223 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G14410 58.3 8.8e-40 161.0
Cme04g00808 . 1 234 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 64.6 3.0e-57 218.8
Cme04g00805 . 1 209 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 52.1 1.1e-51 200.3
Cme11g00758 . 5 249 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 54.4 2.5e-43 172.6
Cme12g01447 . 1 234 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 50.2 2.5e-43 172.6
Cme04g01820 . 61 241 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G41130 63.3 3.8e-58 221.9
Cme08g00928 . 46 298 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 57.4 4.2e-46 182.2
Cme06g02003 . 1 109 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 76.1 1.1e-40 164.5
Cme07g01839 . 169 410 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G43140 54.8 1.6e-53 206.8
Cme12g01565 . 171 292 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 66.7 5.3e-42 168.3
Cme11g02089 . 40 194 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 59.4 2.1e-42 169.5
Cme06g00797 . 41 196 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 54.5 2.1e-39 159.5
Cme11g02089 . 38 197 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 62.1 8.6e-46 180.6
Cme06g00797 . 41 199 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 51.5 1.3e-38 156.8
Cme07g01937 . 26 170 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 58.6 2.9e-43 171.8
Cme07g01937 . 24 157 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 68.1 1.2e-41 166.4
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007383 2 1 1 3 2 1 2 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 0 2 1 1 36
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
41248 PF00010 HLH 8.60E-06 No_clan Cme TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cme04g02213 Cme_Chr04 FPKM 45.001888 47.230797 47.65274 49.465969 39.425426 38.871784 39.051914 88.857384 91.243904 91.614021