Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g02217 ATGGCTGATTTTTCAGACTACTTTCTTCTTCTCTCTCTCTTGTTAACCTCCTTCCTCTTTGTTCGAGTTCTCTTCACTCGAACTCACCCCGACAAGCTTCGTCGTCCGCCGAGCCCACTATCCTTGCCGGTGATCGGCCACCTCCACCTCCTTGGTCAAATCCCTCACCAAGCTCTTTACAAATTGTCATGTCAATATGGACCATTAATACATCTCTTTTTTGGCTCTAAGCCTTGTGTTATTGTCTCTGATTCAGAAATGGCTAAACAATTCCTCAAAACTAATGAATCCTCCTTTTTGAACCGACCCATTAGACTCAACATAAACTATCTCACTTACGGCTCTAAGGACTTCACTTTTGCACCCTATGGACCCTATTGGAAGTTCTTGAAAAAGTTGTGCATGACGGAGCTTCTTAGTAGTCGGACTCTCGATCTTTTCCATCCAATAAGGGATGAGGAAATGAGATTGTTTGTGCAAAGGATTCATGAACAAGCTATCGTAGGAGGGACGGTTGATGTTGGAGCTGAGCTTTCAAGGTTGATGAACAACATAATATCGAGAATGGTGTTGAGGAAAAGATGTACGGAGAAGGACAATGGATCAGAAGAGGTGGGGAAGCTGGTGGGGGAGATGTGCGAGCTCGCCGGAGCACTTAACGTCGCTGATATGATTTGGTTTTGCAAGAGATTGGATCTCCAAGGATTTGGAAGAAGGGTAAGAAATGTGAGAAAGAGGTATGATATAATGATGGAGAAGATAATAAATGAGCATGAAGAAGAGAGGAAGAGAAAAAAGGAGGATGGTGAAGATGATGGAGTTAAGGATTTGCTTGATATTTTACTTGACATTTATGAAGATCAAAGCTCAGAAATCAAACTCACAAGAGACAATATTAAGGCTTTTGTTATGAACATATTCGGCGCCGGAACTGAAACATCAGCGGCGGCCACAGAGTGGGCATTAGCAGAGCTAATCAACAACCCATCCGCCATGGCCAAAGCAACTCAAGAACTCCACTCCGTCACAGGAAATAATACCCGCCTCCTTCTCGAATCCGATCTCTCCAAACTCCCCTATCTCCAAGCCGTCGTCAAAGAAACCCTCCGCCTCCACCCAACCGCGCCGCTCATCGTCCGGGAGGCCACCGAGCCATGCGACGTTGCCGGCTACCACATTCCAGCCAAGACCCGCCTGCTTGTCAACATTTGGGGCATAGCCCGCGATCCGTCCCGTTGGCTTGAACCGACCCAGTTCGACCCCGAACGGTTCTTGAACCGCCCGTCCGGTTCTGACCAACAGAGCTTTGATCTTATGCCATTTGGGAGTGGGCGCCGGAGCTGCCCTGGCGCCGCCCTGGCTCTGGTTGCGATGCCGATGGTTCTCGGGAGGTTGATTCAGTGCTTTGAGTGGAGGGTTGATGGCGGCGGCAGCGTTGATATGGAAGAAGGGCCTGGAATTTCTCTTCGACGAGCTCGTCCTTTGATTCTAATTCCTGTGCCTAAGCTTCATCTTTTTCCTTCCATATAA 1530 48.04 MADFSDYFLLLSLLLTSFLFVRVLFTRTHPDKLRRPPSPLSLPVIGHLHLLGQIPHQALYKLSCQYGPLIHLFFGSKPCVIVSDSEMAKQFLKTNESSFLNRPIRLNINYLTYGSKDFTFAPYGPYWKFLKKLCMTELLSSRTLDLFHPIRDEEMRLFVQRIHEQAIVGGTVDVGAELSRLMNNIISRMVLRKRCTEKDNGSEEVGKLVGEMCELAGALNVADMIWFCKRLDLQGFGRRVRNVRKRYDIMMEKIINEHEEERKRKKEDGEDDGVKDLLDILLDIYEDQSSEIKLTRDNIKAFVMNIFGAGTETSAAATEWALAELINNPSAMAKATQELHSVTGNNTRLLLESDLSKLPYLQAVVKETLRLHPTAPLIVREATEPCDVAGYHIPAKTRLLVNIWGIARDPSRWLEPTQFDPERFLNRPSGSDQQSFDLMPFGSGRRSCPGAALALVAMPMVLGRLIQCFEWRVDGGGSVDMEEGPGISLRRARPLILIPVPKLHLFPSI 509
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 29362209 29364663 - MELO3C009650.2.1 Cme04g02217 326478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g02217 509 PANTHER CYTOCHROME P450 5 502 - -
Cme04g02217 509 SUPERFAMILY Cytochrome P450 36 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02217 509 Pfam Cytochrome P450 36 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02217 509 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02217 509 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02217 509 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02217 509 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02217 509 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02217 509 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02217 509 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02217 509 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02217 509 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02217 509 Gene3D Cytochrome P450 25 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02217 509 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02217 509 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02217 509 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02217 509 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02217 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Cme04g02217 509 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 5 502 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g02217 Cme-Chr4:29362209 Cme04g01347 Cme-Chr4:18993933 8.49E-129 dispersed
Cme04g02217 Cme-Chr4:29362209 Cme04g02218 Cme-Chr4:29366079 5.35E-126 tandem
Cme07g00217 Cme-Chr7:1430529 Cme04g02217 Cme-Chr4:29362209 3.56E-33 transposed
Cme08g01542 Cme-Chr8:15101601 Cme04g02217 Cme-Chr4:29362209 0 transposed
Cme01g02492 Cme-Chr1:32986526 Cme04g02217 Cme-Chr4:29362209 2.47E-130 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g02217 K24188 - csv:101205411 849.736