Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g02218 ATGTATAGAAACCAAGAAAAGAAAAGACTATCACACAACACCATGAAGGCCATGACCACCATCTTTGACAACACCACCTCTCCCTCACAATTTTGGTCCTTCTGGTTCATCACTGCCCTCCTCCTCCATCTCTTACTCAAAAAGATTCTAACAAAATCTAAACCCTCATCCCCCAACACGACCAAGCCTCCCCCGAGCCCCCCGGCGCTCCCTCTCATTGGTCACCTCCACCTTCTCACCCCTGTTATTGTCACCTCCTTCCAAACCCTAGCTCGCCGTTATGGCCCTCTCATCGAGATTCGACTCGGTGCGTCGAAGTGTGTCATCGTCTCAACCGCAGCAGTTGCCAAAGAGATTCTAAAGACTCACGAACACAATTTCCTCTCCCGACCGGAGTTCGGTGCCTCCGAGTACTTCATTTACCGAGGGTCGAGGTTCGTCATGGCCCAATATGGACCCTATTGGCGATTCATGAAGAAGCTAACCATGACACGACTTCTCTCGCCACCACAGCTAGCGGTCTCCACAGCCATTCGGAGTGATGAGATAGTGAAACTTGTGGAGAGAATAGAAGCAAGTTCAAGGGAAGGGAAGCCCTCAGATATGAGATTGGAGTTTACTACTTTGACAAACAATATTATATCAAGGATGCTTTTGAGTACAAGGTGTTGTGGAGGGAAAGATGAGGCCAAAGAGATTAAGGAATTGGCTTGGAGGATTAATATGTTGGCTGGGAAATTGAGTTTGGGGGATATTTTGGGAGCTCTGAAAGTGTTTGATTTCTCTGGAAATGGAAAGAAGTTTGTGGAAACTTTGAAGAAATTTGATGGGTTGGTAGAGAGGATAATGAAAGAGCATGAAGCTGCCATTGATAGTGGGGATGAAGAAAGAAAAAAAGACTTGTTGGATATCTTGTTGGAGATTTACAACGATCCAAATGCTGACATGAAGATAACCCGAACCGATATCAAGTCCTTCTTGCTTGACCTTTTCATGGCAGGCACCGACACAACGGCAACGGCAATGCTGTGGGCAATGGGAGAGCTCCTAAATTGTCCAGAATCACTCCAAAAGCTAAGAAAAGAGATAACATCAGTAGTTGGAAACAAGAAGCCAGTCCAAGAATCCGACCTCCCCAACCTTCCCTATCTCCGAGCAATTGTTAACGAAACGCTCCGTCTCCACCCGTCAGCGCCGATCATCATCAGGGAATGTTTAGATGACTGCAACATCAACGACTCACTAATCAAAGCCAAAACTCGGGTCTTGATCAATGCATACGCGGTCATGAGAGACCCCGAGTCGTGGTCGGAACCCGACAAGTTCTTGCCTGAGAGGTTTTTGGAAGGCTCCCATGAGAATATTGGCAGCCACCGAATGGAGATGAAAGGACAAAATTTCAGGTACATTCCGTTTGGGAGTGGGAAGAGAGGTTGCCCTGGATCTTCCCTTGCTTTGTTGGTTTTTCCACGTGCAATTGCCACTATGGTGCAACGGTTTGATTGGAAGATCGGTGGGGATAACGGCGGCAACGTTGATTTGACTCTGGGGTCGGGATTTGCTGCAGAGATGGCAACACCGCTCATCTGCTATGCAAATCCTATTTTGTGA 1611 47.3 MYRNQEKKRLSHNTMKAMTTIFDNTTSPSQFWSFWFITALLLHLLLKKILTKSKPSSPNTTKPPPSPPALPLIGHLHLLTPVIVTSFQTLARRYGPLIEIRLGASKCVIVSTAAVAKEILKTHEHNFLSRPEFGASEYFIYRGSRFVMAQYGPYWRFMKKLTMTRLLSPPQLAVSTAIRSDEIVKLVERIEASSREGKPSDMRLEFTTLTNNIISRMLLSTRCCGGKDEAKEIKELAWRINMLAGKLSLGDILGALKVFDFSGNGKKFVETLKKFDGLVERIMKEHEAAIDSGDEERKKDLLDILLEIYNDPNADMKITRTDIKSFLLDLFMAGTDTTATAMLWAMGELLNCPESLQKLRKEITSVVGNKKPVQESDLPNLPYLRAIVNETLRLHPSAPIIIRECLDDCNINDSLIKAKTRVLINAYAVMRDPESWSEPDKFLPERFLEGSHENIGSHRMEMKGQNFRYIPFGSGKRGCPGSSLALLVFPRAIATMVQRFDWKIGGDNGGNVDLTLGSGFAAEMATPLICYANPIL 536
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 29366079 29368230 - MELO3C009649.2.1 Cme04g02218 326479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g02218 536 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 472 481 IPR017972 GO:0005506|GO:0016705
Cme04g02218 536 PANTHER CYTOCHROME P450, FAMILY 712, SUBFAMILY A, POLYPEPTIDE 1 21 534 - -
Cme04g02218 536 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02218 536 PRINTS E-class P450 group I signature 425 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02218 536 PRINTS E-class P450 group I signature 115 136 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02218 536 PRINTS E-class P450 group I signature 385 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02218 536 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02218 536 PRINTS E-class P450 group I signature 469 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02218 536 PRINTS E-class P450 group I signature 479 502 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02218 536 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02218 536 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 21 534 - -
Cme04g02218 536 PRINTS P450 superfamily signature 479 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02218 536 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02218 536 PRINTS P450 superfamily signature 470 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02218 536 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02218 536 Pfam Cytochrome P450 64 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02218 536 SUPERFAMILY Cytochrome P450 61 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02218 536 Gene3D Cytochrome P450 54 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g01665 Cme-Chr4:23936653 Cme04g02218 Cme-Chr4:29366079 4.72E-132 dispersed
Cme04g02218 Cme-Chr4:29366079 Cme08g01542 Cme-Chr8:15101601 3.66E-140 dispersed
Cme04g02217 Cme-Chr4:29362209 Cme04g02218 Cme-Chr4:29366079 5.35E-126 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g02218 - - csv:101205168 919.842