Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g02239 ATGAGAACGATTCTCCATTCACTTGTCTCTAACTGGAAACCTCATTTACCTGTGTTTCGTCTTGTTAGTGCAACGGTAGAACTTAGAAGCAACTTCGTGAGGAATGTGTTTTATGGGTTTGGTGAAAATTTGTCTTCAAAACAATGTCTTGCAGTTAGCACTGTCTTGGGGTTGGAGGAAGGCAAGGAATGTGTCATTGTTGGAACCGTCTACAAGCACATGAAACTTAAACCTACCATTCTGGATGAGTATTCAAAGGAGAGATCTGCCATCCCACTTGTTAAGCCGCACAACTTTATGCATCCAGATGATCATCTTGTATTGGAAGATGAAAGTGGCAGAGTAAAGCTTTCTGGGGATGTGCTTTTACCTTCTGTGTATGTTACAGGGATTGTCCTTGCATTGCATGGAAAGGAAACTTCCGTTGGTGACTTTTTGGTTTTGGACATCCTAGAAGCTGACTTGCCACCCCAGATAGAGCGGCCGCTCATATCAAACTGTGAACCTAAACTGCTTTACTGCGCCTTGGGGGAAGGACTTGAAATGGATGATGGCTATCACTTGATTAATTCAACTAAGATTCAAATGCATGCAGGTGAAGATAAGTACGTGATTTTTGTGTCGGGCCTAAGTATTGGGAGTAGCATCTCCAATCCTCTACAGTTTCAGCTCCTTGTTGATCATATAACAGGACATTTAGGGGATGAGAAGGAACAGGGGATTGCGGCTCAAATAGTTCATGTTGTCATTTGTGGAAACTCTGTTGAAATTCCTCGAGGAATTTTAAATGGGCAGGAGTCTTTGATTTCAGTAGCTGAAGAAGGCTTGTTTGTCAAAGTTGTTTCAAATGATGTCAGTGATTATAGGTTTTTTGTTGATGCATGCATGATGTATTTTGGGCAGCATTTGTCTGCAAAGGACCAAACAAAGCTGACAGAACCGCTTAAAGAGCTAGACATCCAATTGAATCAGCTTGCTGCAGGTTTACCTGTGGACATCATGCCGGGATCCAGTGACCCAGCCAATTTTTCCTTGCCTCAGCAGGTCAAATCTTTACAGCCGAGAACTCCCACTTTCCATTCTCGGTTTCTTGGAACATCAGGTCAGAATGTAGATGATCTCGAGAAGTACTCAGAGGCTAAAGATAAACTAGAATTTATGGAGAGGACTTTGAGATGGAGACATCTAGCACCAACTGCTCCAAATACTCTTGGTTGTTACCCATTCACTGACCGAGATCCTTTCCTGATCGAGAGCTGTCCTCATGTTTATTTTATTGGGAATCAGGACAAGTTTGATACTCGTTTAATAAAGGGAGCTGAAGGGCAGATGGTAAGACTCATTGCGATTCCAAGATTTTGTGAGACGGGGATTGCCGTAATGGTAATTTGCTTTTACTTCAATTCACCCTTTAATATTGTTGCTGCAATGCTTAACTTGAGAAACCTTGAATGCCACACTCTGAGTTTTGGGACTGAATTCAGCTGA 1488 42.27 MRTILHSLVSNWKPHLPVFRLVSATVELRSNFVRNVFYGFGENLSSKQCLAVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLEDESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISNCEPKLLYCALGEGLEMDDGYHLINSTKIQMHAGEDKYVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQESLISVAEEGLFVKVVSNDVSDYRFFVDACMMYFGQHLSAKDQTKLTEPLKELDIQLNQLAAGLPVDIMPGSSDPANFSLPQQVKSLQPRTPTFHSRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGAEGQMVRLIAIPRFCETGIAVMVICFYFNSPFNIVAAMLNLRNLECHTLSFGTEFS 495
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 29530212 29536729 + MELO3C030998.2.1 Cme04g02239 326500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g02239 495 Gene3D - 181 357 - -
Cme04g02239 495 Pfam DNA polymerase delta subunit OB-fold domain 48 150 IPR040663 -
Cme04g02239 495 Gene3D - 358 494 - -
Cme04g02239 495 Gene3D - 27 155 - -
Cme04g02239 495 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 29 490 IPR024826 -
Cme04g02239 495 Pfam DNA polymerase alpha/epsilon subunit B 360 433 IPR007185 GO:0003677|GO:0006260
Cme04g02239 495 Pfam DNA polymerase alpha/epsilon subunit B 204 348 IPR007185 GO:0003677|GO:0006260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g02239 K02328 - csv:101221438 648.662