Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g02412 ATGGAAATTTTCTTTCTTCTTCTCCCAATTCTTCTCTTTTTCTTTTTTCTTATATTCATCTTTATAATCCTCTTTCTTTTGAGGCCAAAATTTCTATGCAGCTGTGAAATATGCCAAGCTTATTTGGCTTCATCTTGGTCAAAAGATTTCCATAACCTCTGTGATTGGTATTCTCATCTTCTTCGGCAATCTCCGACGAAGACCATTCACATCCACGTTTTAAGGAACACGATCACGGCCAATCCCGACAACGTGGAATACATTCTCAAGACAAAATTTGAAAATTACCCAAAAGGGAAAATATTCTCCTCGATTCTTGGCGATTTTTTGGGCCGTGGGATTTTCAACGTCGATGGCGATTTGTGGCAGTTCCAGAAGAAAATGGCGATTATTGAGCTTGGTCAACAGTCGATTAGATCCTACTGTTTTGAAATTGTTTCTCAGGAGATTCATTCCCGCCTTTTGCCGCTTCTTTCGTCGGTTGCCGATGGCGGCAGTGGCGGAGCTTTGGATTTACAAGATGTGTTTAGAAGATTTGCTTTTGATAGTATTTGTAAGTTTTCATTTGGGTTGGATCCAATGTGCTTGGAGCTGTCGCTTCCCATGTCGGATTTCGCCGTCGCTTTCGATCTCGCTTCTAAGCTTTCTGCTGAAAGAGCCATGGCGGTCCCGCCGTTGATCTGGAAAATCAAGCGAATGCTCAACTTAGGGAGAGAGAAGGAACTTAAGAAAGCAATAAAGTTAATAAACATGTTGGCTCGTGAAGTAATTCGACAAAGAAGAAAATTAGGATTCTCGACCCATAGAGACCTCCTCTCTCAATTTATGCGAATTGTGTCTGACGAGACTTTCTTACGAGACATCGTTGTTAGCTTTCTTTTAGCCGGTCGTGATACTATTGCCTCTGCCCTCACTAGCTTCTTTTGGGTCATTTCCTCCCATCCTACCGTAGAGTCTGCTATCCAACTCGAGGCTGATCGAGTAATTGGCCCGAACTCAAACCCTACATCCTTTGACCAAATACGAAATCTTCACTACTTACAAGCTGCTATCTTCGAGTCCATGAGGTTGTATCCTCCCATTCAGTTTGACTCCAAGTTTTGCCAAAACGACGACATTTTACCCGATGGAACGTTCGTTCGACGTGGGACTCGAGTCAGTTACCATCCTTATGCTATGGGTCGAGTGGAGCAAATTTGGGGAACAAACTGCCTCGAGTTCAACCCAGAAAGATGGCTAAAAAACAACATATTTTGTCCTGAAAATCCGTTCAAGTATCCCATATTTCAAGGGGGATTTCGGATTTGTTTAGGGAAAGAAATGGCTCTGTTTGAGTTGAAAATTGTAGCACTTTCAGTTATTCGTCATTTTCGAATCCAATCTACAACACCCTCGTCTGTGGCGCCCCCGCGATTCTCCCCTGGCCTCACTGCAACCTTTTGCGGTGGATTCAAAGTTTTAGTTAGTAAGAAGAGAAAATGGGAGTGA 1488 42.94 MEIFFLLLPILLFFFFLIFIFIILFLLRPKFLCSCEICQAYLASSWSKDFHNLCDWYSHLLRQSPTKTIHIHVLRNTITANPDNVEYILKTKFENYPKGKIFSSILGDFLGRGIFNVDGDLWQFQKKMAIIELGQQSIRSYCFEIVSQEIHSRLLPLLSSVADGGSGGALDLQDVFRRFAFDSICKFSFGLDPMCLELSLPMSDFAVAFDLASKLSAERAMAVPPLIWKIKRMLNLGREKELKKAIKLINMLAREVIRQRRKLGFSTHRDLLSQFMRIVSDETFLRDIVVSFLLAGRDTIASALTSFFWVISSHPTVESAIQLEADRVIGPNSNPTSFDQIRNLHYLQAAIFESMRLYPPIQFDSKFCQNDDILPDGTFVRRGTRVSYHPYAMGRVEQIWGTNCLEFNPERWLKNNIFCPENPFKYPIFQGGFRICLGKEMALFELKIVALSVIRHFRIQSTTPSSVAPPRFSPGLTATFCGGFKVLVSKKRKWE 495
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 30766416 30768767 + MELO3C009458.2.1 Cme04g02412 326673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g02412 495 SUPERFAMILY Cytochrome P450 51 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02412 495 PANTHER CYTOCHROME P450 14 485 - -
Cme04g02412 495 PANTHER CYTOCHROME P450 FAMILY PROTEIN, EXPRESSED 14 485 - -
Cme04g02412 495 PRINTS P450 superfamily signature 295 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02412 495 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02412 495 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02412 495 Gene3D Cytochrome P450 41 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02412 495 Pfam Cytochrome P450 68 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02412 495 PRINTS E-class P450 group I signature 284 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02412 495 PRINTS E-class P450 group I signature 304 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02412 495 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02412 495 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g02412 Cme-Chr4:30766416 Cme12g00613 Cme-Chr12:10954273 0 dispersed
Cme04g02412 Cme-Chr4:30766416 Cme01g02420 Cme-Chr1:32482869 7.83E-107 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g02412 K20624 - csv:101207686 932.169