Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g02414 ATGGCAAGAAAAGCCAAGATTTATAGTTATGGAAGAAGCTTTAATGGATTTGCTGCAAGACTCTTACCCCATGAAGCCGACAAATTAGCAAAGGAAAAAAAAGTGGTGTCAGTATTTCGGAGCAAGACAAGAAAATTGCATACAACAAGATCATGGGATTTTTTGGGGCTGTCGGAGGCGGCGAGCCGGCGGAACGCCGCCGCAGAATCCAACGTAATCGTCGGACTATTGGATTCGGGGATATGGATGGAAGGTCCAAGTTTTAAAGATGATGGTTATGGTGAAATTCCTTCTAAGTGGAAGGGCAAATGTGTTACTGGTCATAATTTCACTTCCTGTAACAGGAAAGTGATCGGCGCGAGGTTCTTCGACATTGAAGAAATAGATAATTCCAACAATAAAAGCCCCGTCGACGAGATCGGTCACGGCTCCCACACCGCCTCAACAATCGCCGGAGCTTTCGTCGACGGCGCTAGTCTCTACGGCGTCGCGGGAGGAAAGGCGCGCGGCGGCGTTCCAGCGGCGAGAATCGCGATGTACAAAGTGTGCTGGGCCGTAGGGTGCAGTGACGTGGACTTGCTGGCGGGATTCGACCATGCGATCGCCGACGGAGTGGACATCATATCGGTGTCCATCGGCGGCGAGTCGATGGAATTCTTCAATGATCCGATCGCTATAGGATCCTTTCACGCAATGGAGAAAGGAATATTGACGAGTTGCTCGGCGGGAAACAGCGGGCCGGATTTAAAGACGGTGGAGAACACGGCGCCGTGGATAATGACGGTGGCGGCTTCTACAATTGATAGGGATTTCAGTACCGTCGTGAAGTTGGGTAACAATAAGAAGCTCTCTGGAGTGTCAGTAAACACATTCACTCCAAAGAAGCAAATGTACCCTTTGATCTCCGGATCAAATGCTGCATTACCTAATCAATCCTCTGATCTCGATCTTTATCCAAGTTGGTGTGATTATGGGAGTCTTGATGAGAAAAAAGTGAAAGGAAAAATAGTGTATTGTTTGGGATCAATAGACCAAGAATACACCATTTCTGACCTTGGAGGCGTAGGTGTAATTTCCAATCTTTTGAACATTACTGAAATGGCTATTACCACTCCTATTCCATCCACTCATCTTTCCTCTACCAATTCAGATTATGTTGAAGCCTACATCAACTCCACCAAAAACCCTAAAGCCGTCATTTACAAAACTACCACAAGGAAGGTTGATGCTCCCTTTTTGGCTTACTTCTCTTCTAAAGGACCTCAAACCATCGCTCTCAATATTCTTAAGCCGGACATTGCAGCACCAGGGGTGAACATATTAGCAGCATACTCAAATTTGGCTTCAATTCCAGACAATAGACATTCCCTTTTCAATCTTCTTTCTGGTACTTCTATGGCTTGTCCTCACGCCGCCGCTGCGGCTGCGTATCTCAAAGCTTTTCACCCCACTTGGTCCCCCGCTGCCCTCAAGTCCGCCCTTATGACCACCGGTATGTATCCTCCTTTTCCTTCTTTCTTTCTATATTGCTCTAAGGCGACGCCATTGAAGATCGGAGATGAACTAGACGTGATTGGCGCCGGCGCTGGCCAAATAAATCCGACCAAAGCGGTGCATCCAGGCCTCATTTACGACCTCTCTCGCACCTCTTACCTTTCTTTCCTCTGCACCAACAAACGCTACTCCGACTCCGCCCTCGCCATCCTTACAGGAGACGCTTCTTTAAACTGCTCCGACGTCCCGCAAGCCAGTGGCTCCGACGCCATCAACTACCCTTCCATGTACGTCCCCGTCGACCGAGACGCCACCTCTGTCTCCGCCGTCTTCCACCGGACCGTCACCCACGTCGGCTTCGGCCCATCGACGTACAAAGCGAAGATTAAATCGCCGGCAGGTTTGTCCGTGAAAGTCTCGCCGGAGACTCTGAAGTTCGATCGGGCGTACAAAAAACTGTCGTTTAAGGTGGTGGTGAAAGGGGCAGCGCCGGCGGTGGGGCAGGCACCGTTGACGGCTTCACTTGAATGGGATGATTCTAAGCATTATGTTAGGAGCCCAATTTTGGTCTTTAAGGTTTAA 2076 49.33 MARKAKIYSYGRSFNGFAARLLPHEADKLAKEKKVVSVFRSKTRKLHTTRSWDFLGLSEAASRRNAAAESNVIVGLLDSGIWMEGPSFKDDGYGEIPSKWKGKCVTGHNFTSCNRKVIGARFFDIEEIDNSNNKSPVDEIGHGSHTASTIAGAFVDGASLYGVAGGKARGGVPAARIAMYKVCWAVGCSDVDLLAGFDHAIADGVDIISVSIGGESMEFFNDPIAIGSFHAMEKGILTSCSAGNSGPDLKTVENTAPWIMTVAASTIDRDFSTVVKLGNNKKLSGVSVNTFTPKKQMYPLISGSNAALPNQSSDLDLYPSWCDYGSLDEKKVKGKIVYCLGSIDQEYTISDLGGVGVISNLLNITEMAITTPIPSTHLSSTNSDYVEAYINSTKNPKAVIYKTTTRKVDAPFLAYFSSKGPQTIALNILKPDIAAPGVNILAAYSNLASIPDNRHSLFNLLSGTSMACPHAAAAAAYLKAFHPTWSPAALKSALMTTGMYPPFPSFFLYCSKATPLKIGDELDVIGAGAGQINPTKAVHPGLIYDLSRTSYLSFLCTNKRYSDSALAILTGDASLNCSDVPQASGSDAINYPSMYVPVDRDATSVSAVFHRTVTHVGFGPSTYKAKIKSPAGLSVKVSPETLKFDRAYKKLSFKVVVKGAAPAVGQAPLTASLEWDDSKHYVRSPILVFKV 691
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 30779716 30782826 + MELO3C009456.2.1 Cme04g02414 326675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g02414 691 ProSiteProfiles Serine proteases, subtilase domain profile. 51 538 - -
Cme04g02414 691 ProSitePatterns Serine proteases, subtilase family, serine active site. 463 473 IPR023828 -
Cme04g02414 691 Gene3D Peptidase S8/S53 domain 71 551 IPR036852 GO:0004252|GO:0006508
Cme04g02414 691 Pfam Fibronectin type-III domain 589 688 IPR041469 -
Cme04g02414 691 Pfam Subtilase family 70 498 IPR000209 GO:0006508|GO:0008236
Cme04g02414 691 Gene3D - 268 406 - -
Cme04g02414 691 CDD Peptidases_S8_3 45 497 IPR034197 -
Cme04g02414 691 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 47 IPR037045 -
Cme04g02414 691 CDD PA_subtilisin_like 274 400 - -
Cme04g02414 691 SUPERFAMILY Subtilisin-like 46 542 IPR036852 GO:0004252|GO:0006508
Cme04g02414 691 PANTHER CUCUMISIN PROTEIN 1 691 - -
Cme04g02414 691 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 691 IPR045051 -
Cme04g02414 691 Gene3D - 555 690 - -
Cme04g02414 691 Pfam Peptidase inhibitor I9 3 47 IPR010259 -
Cme04g02414 691 PRINTS Subtilisin serine protease family (S8) signature 462 478 IPR015500 -
Cme04g02414 691 PRINTS Subtilisin serine protease family (S8) signature 138 151 IPR015500 -
Cme04g02414 691 PRINTS Subtilisin serine protease family (S8) signature 69 88 IPR015500 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme04g02414 Cme08g01214 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g02414 Cme-Chr4:30779716 Cme10g01530 Cme-Chr10:19427375 0 dispersed
Cme04g00451 Cme-Chr4:3581832 Cme04g02414 Cme-Chr4:30779716 2.83E-07 transposed
Cme04g02414 Cme-Chr4:30779716 Cme08g01214 Cme-Chr8:8559979 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g02414 - - cmo:103486592 1256.12