Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g02444 ATGGAGCTTGAAATTATTGCATGCTTTCTTTTACTATTGTTTTTATGGCTGTGGCGCTGCCGTCGAGCAGGGGCCCGTGAGCAACTTCCACCGGGGCCGCCATGTTTCCCGGTAGTTGGAAATTTGCTCCAACTAAGTTTTTCCGCTCACGAATCCTTCACAAAACTCGCTGCTAAGTATGGCCCAATCATGACCCTCCAACTCGGATCAATGAAAACAGTCGTAATTTCCTCAAGTACGGCGGCGCGTGAGATGTTCAAGACCCACGACGCGCCGCTCTCAGGACGAATGATATACGAAGCAATGAAAGGAGACCACGGCACACAAGGCTCCTTAATCACTTCTCAATATGGTCCTCACTGGCGGATGCTACGACGACTTGCCACATCGGAGTTCTTCGTTGCCCGCCAGCTCGAATCCATGAAACACGTTCGCCGCCACTGCATCGACGCCATGATCCGCCACGTCCAGGAGGGATGCGACCCGTGTGGGAACGCTCAGGCGTTGGACGTGGGGAAATTCATGTTCGTAATGAGCTTTAACTTAATTGGGAATTTGATATTTTCGAAAGATTTATTAGAGGCAAATTCGAAGAGGGGGAAGGAATTTTATTACCATACGAGAAAGGTAATGGAGATGGCCGGAAAGCCGAATGTAGCGGACTTTTTGCCGGCGTTACGGTGGTTGGATCCACAAGGGATAAGGAGGAAGACGCAATTTCATGTGAATAAAGCGTTTGAAATTGCTGGGGAATTTATAAAAGAGAGATTATTAATAAGGGGAAAAAAGGATATCATTAATAATGATGATGATGATGAAAAAATAGAAGAAATTAGGAAAAAAGATTATTTGGATGTTCTTTTGGAGTTTCGTGGCGATGGAGTTGAGGAGCCTTCTTGTTTCTCTTCTTGGATCATCAACGTTATCGTCTTCATGTTCACGGCTGGGACAGACACAACCACCAGTACATTAGAGTGGGCAATGGCGGAGCTCCTCCACAACCCAGCAGCGCTGCAGAAACTTCAGGCAGAGCTACGAACCACCATTGCGCCGAACGAAAATCTCGAAGAAACTCATCTCCAAAACCTCCCATATCTGGACGCCGTCGTCAAAGAAACCCTCCGTCTCCACCCGCCGCTGCCGTTCCTCTTCCCAAGAATGGCCATGAAGCCTTGCAACATCCTCGGCTATCGTATTCCGGCTGAAACCCAAGTCTTGGTCAACTTTTGGGCCATCGGACGTGACCCCAAAAACTGGGAAGACGCTTTAGTTTTCTCGCCGGAGAGATTCTTTGATCCCTCCGGCGGCAAGGATTTCAAAGGTCAACACTTTGACTTCATTCCTTTTGGCTCCGGGCGCCGCATGTGCCCGGCGGTGCCACTGGCATCGAGAGTTCTTCCTATGGCTTTGGGGTCGTTGATCTTGTCGTTTGATTGGGCTTTGCCGGACGGAGTTTTGCCGAAGGAAATGGACATGTCGGAGCAAATGGGAATTACTCTACGAAAGAAGGTTCCTTTGAAGGCTATTCCGACTCCTCACAAACGACGCCGTCTTGATTAA 1560 48.85 MELEIIACFLLLLFLWLWRCRRAGAREQLPPGPPCFPVVGNLLQLSFSAHESFTKLAAKYGPIMTLQLGSMKTVVISSSTAAREMFKTHDAPLSGRMIYEAMKGDHGTQGSLITSQYGPHWRMLRRLATSEFFVARQLESMKHVRRHCIDAMIRHVQEGCDPCGNAQALDVGKFMFVMSFNLIGNLIFSKDLLEANSKRGKEFYYHTRKVMEMAGKPNVADFLPALRWLDPQGIRRKTQFHVNKAFEIAGEFIKERLLIRGKKDIINNDDDDEKIEEIRKKDYLDVLLEFRGDGVEEPSCFSSWIINVIVFMFTAGTDTTTSTLEWAMAELLHNPAALQKLQAELRTTIAPNENLEETHLQNLPYLDAVVKETLRLHPPLPFLFPRMAMKPCNILGYRIPAETQVLVNFWAIGRDPKNWEDALVFSPERFFDPSGGKDFKGQHFDFIPFGSGRRMCPAVPLASRVLPMALGSLILSFDWALPDGVLPKEMDMSEQMGITLRKKVPLKAIPTPHKRRRLD 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 31043759 31046875 - MELO3C009425.2.1 Cme04g02444 326705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g02444 519 PANTHER CYTOCHROME P450 FAMILY 1 5 513 - -
Cme04g02444 519 PANTHER CYTOCHROME P450 76A1-LIKE 5 513 - -
Cme04g02444 519 SUPERFAMILY Cytochrome P450 30 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02444 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Cme04g02444 519 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02444 519 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02444 519 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02444 519 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02444 519 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02444 519 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02444 519 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02444 519 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02444 519 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02444 519 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02444 519 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02444 519 Gene3D Cytochrome P450 19 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme04g02444 519 Pfam Cytochrome P450 30 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g02444 Cme-Chr4:31043759 Cme09g01693 Cme-Chr9:21585213 2.70E-121 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g02444 - - csv:101222700 947.577