Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g02456 ATGGGTACCCATGGCCGAAGCAGTGAGAAGAAAAGAGAGAAGACATCATCTTCTCGGAAACGCAGCAGAAGAAGGTCCGACGACTCTGAATCTGATTCCGACGACTCCGATAGTCGGGATTCATCTCCTGTAACGAGGTCCCGGAAGCGCAGGGAAAAACGCGATGCTAGTAGAAACAGCCACCGGAGTCGGCGACGGAGCTCCTCACGTGGGCGGGATTCTGGTGATGATAGTTCGAATGATAGTTATGACAGTGATGATGGGGGTCGTAAGAAGAGTAAGTCTTTGAGGAAAGTTACCGAAGAGGAAATTAGCGAATACTTGGCCAAGAAAGCGCAGAAAAAGGCCTTGCGAGTTGCGAAGAAATTGAAGTCACAGACGGTTTCTGGTTATTCTAACGATTCGAATCCATTTGGCGACTCGAATCTGAATGAAAAATTTGTTTGGCGGAAGAAAATTGAGCGTGATGTTACTCAAGGCGTGTCACTTGATGCCTTTTCAGTGAAGGCTGAAAAAAAAAGACAGAGAGAAAGAATGGCAGAGATTGAAAAGGTGAAGAAAAGGAGGGAGGAAAGGGCTCTTGAGAAAGCACAACATGAGGAAGAAATGGCATTGCTAGCTCGAGAACGTGCTCGTGCTGAATTTCAGGACTGGGAGAAAAAGGAAGAAGAGGTTGCATACTCACTTTTTCATTTTGATCAAAGCAAAGTCAGATCTGAGATAAGAGTTCGTGATGGGCGTTCAAAACCTATAGATGTTCTGTCCAAGCAACTGAATGGGTCAGATGACTTTGATATAGTAATCAATGAGCCATACACTGTATTCAAGGGATTGACTGTGAAAGAAATGGAAGAGCTTCGTGATGACATCAAAATGCATCTTGATATGGACAGGGCAACGCCTACACATATCGAGTATTGGGAGACGCTAGCATATAAGGAATTAGGTCAGAATTTTAAATTAGACTCCTCCTTAGCCATTAAGTCATTTTTTAAAGTCAAACCATGTATTTGGGACGTTCAGTGCTCAATTTCACGGTCTTTCCTATCGGCACTTCTGGTGGTTTGTGATTGGGAACTAGCTGAAGCTCGAAAGAAGGATGCTCTTGATAGAGCCAGAGTTCGTGGTGAGGAGCCTCCTCCTGAGTTGCTTGCAGAAGAAAGGGGCCTGCATTCTAGCATTGAAACAGATGTCAAAAATCTGCTGGAAGGGAAGACGTATGGTGAATTGGAGGCATTACAATCTCAAATTGAGTCACAGATGCGATCTGGAACAGCAAAGGTGGTTGAATACTGGGAGGCTGTCCTAAAGCGCCTTCATATATACAAGGCCAAGGCTTGCTTGAAGGAAATTCATACGAAAAAACTGCATGAGCATCTTGTGCGTCTTGAGGAACCTTTGGAGGATGATGAAGAACATCTGGAGCAAGAAGTCAAGATGGGAACCGATTATTCTATACAAGTGAAAGCTGATGATGATGAGCATGATATTGAAGAACCCCAAACATATTCACCCGATCTCCTCGTGGAAGAATATAATGAAGAGGCAGGATCGTTTTCACCAGAACTTATGCATGGTGATGAGGATGAAGAGGCCGTGGATCCCGAGGAGGATAGGGCCATACTGGAACGCAAGCGTATTGCTGTCTTAGAAGAACAGCAGAGACGGGTGCAAGAAGCAATGGCTACGAAACCTGTTCCAGTAGAGGATAATTTCGAACTGAAAGCCTCGAAAGCCATGGGAGTCATGGAGGAAGGCGATGCAGTTTTTGGATCTGGGGCTGAAGTGAACCTGGACTCACAGGTTTATTGGTGGCATGATAAATATCGTCCAAGAAAACCAAAATACTTCAATCGGGTTCATACAGGATACGAGTGGAACAAGTACAACCAGACTCACTATGATCATGACAATCCACCTCCAAAGATTGTGCAAGGATATAAGTTTAACATCTTCTATCCAGACCTTGTTGACAAGACAAAAGCTCCAACTTACACCATCGAAAAGGATGGAAACAGCAGCGAGACATGTATCATAAGGTTCCATGCAGGGCCACCTTACGAAGATATTGCATTCCGAATTGTAAACAAAGAATGGGAATACTCTCACAAGAAGGGGTTCAAGTGCACATTTGAGCGTGGAATTTTGCACGTATACTTCAACTTTAAACGATATCGTTATCGTAGGTAA 2190 44.2 MGTHGRSSEKKREKTSSSRKRSRRRSDDSESDSDDSDSRDSSPVTRSRKRREKRDASRNSHRSRRRSSSRGRDSGDDSSNDSYDSDDGGRKKSKSLRKVTEEEISEYLAKKAQKKALRVAKKLKSQTVSGYSNDSNPFGDSNLNEKFVWRKKIERDVTQGVSLDAFSVKAEKKRQRERMAEIEKVKKRREERALEKAQHEEEMALLARERARAEFQDWEKKEEEVAYSLFHFDQSKVRSEIRVRDGRSKPIDVLSKQLNGSDDFDIVINEPYTVFKGLTVKEMEELRDDIKMHLDMDRATPTHIEYWETLAYKELGQNFKLDSSLAIKSFFKVKPCIWDVQCSISRSFLSALLVVCDWELAEARKKDALDRARVRGEEPPPELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKVVEYWEAVLKRLHIYKAKACLKEIHTKKLHEHLVRLEEPLEDDEEHLEQEVKMGTDYSIQVKADDDEHDIEEPQTYSPDLLVEEYNEEAGSFSPELMHGDEDEEAVDPEEDRAILERKRIAVLEEQQRRVQEAMATKPVPVEDNFELKASKAMGVMEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYRR 729
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 31123403 31128866 - MELO3C009413.2.1 Cme04g02456 326717
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cme04g02456 729 SMART CactinC_cactus_3 605 729 - -
Cme04g02456 729 PANTHER POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3 347 729 - -
Cme04g02456 729 PANTHER POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3 1 310 - -
Cme04g02456 729 PANTHER BNAC05G02180D PROTEIN 347 729 - -
Cme04g02456 729 PANTHER BNAC05G02180D PROTEIN 1 310 - -
Cme04g02456 729 MobiDBLite consensus disorder prediction 1 102 - -
Cme04g02456 729 MobiDBLite consensus disorder prediction 51 68 - -
Cme04g02456 729 Pfam Conserved mid region of cactin 208 452 IPR018816 -
Cme04g02456 729 Coils Coil 172 216 - -
Cme04g02456 729 MobiDBLite consensus disorder prediction 69 102 - -
Cme04g02456 729 MobiDBLite consensus disorder prediction 1 50 - -
Cme04g02456 729 Pfam Cactus-binding C-terminus of cactin protein 605 729 IPR019134 GO:0005515
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g02456 K25058 - csv:101205416 1145.57