Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g02466 ATGGTCGTCGGAAAGGAAACGGCGCCGATGGAGCAACACAACGCCTCCACTACTGCCGACAGTGAAATCCAAAACAAAGCGAGATTGGCAATTCTAGAGCTCGCCAACATGATCAGCGTTCCCATGTCCCTCAACGCCATCGTCCGTCTCAACGTCGCCGACGCCATCTGGCAAAACGGTTCCAACTCTCCTCTCTCCGCCTCTGAGATCCTCGCTCGCGTAGTTCCGTCCGGCGGTGGCGACGCTCATAATCTCGAGCGCATCTTACGTATGCTCACTAGCTACGGTGTTTTCGAGGAACATCTCAGCCCTAACTCATCTAACCACCGGTATTCCCTCACTGACGTCGGAAAAACTCTAGTCACCGACACCGATGGCCTCTCCTACGCGCCGTACGTGCTTCAGCATCATCAGGACGCGCTTATGAGAGCGTGGCCGCGAGTGCATGAGGCGGCGATTGACTCAACGACGGAGCCGTTCGTTAGAGCGAACGGTGAACCGGCGTACAGTTATTATGGGAAGAAAACGGAGATGAACGAGTTGATGCAGAGAGCAATGGCGGGCGTATCGGTGCCGTTCATGAAGGCTGTATTGGACGGCTACGATGGGTTCAAAGGAGTTGAGAAATTAGTGGACGTTGGTGGAAGCGCAGGCGATTGCTTGCGGATGATTTTACAAAAATATCCTTCCATTAAGGAAGGGATTAACTTCGATCTGCCGGAGGTGGTGGCTAGGGCTCCTCCTATCCCCGGGGTGAGTCACGTTGGAGGTGATATGTTCAAGTCCATACCGACCGCAGACGCTATGTTCATGAAGTGGGTTCTATCTACGTGGACGGACGACGAATGCAAAATAATATTGGAGAATTGCTGCAAATCTCTCCCGGTGGGAGGAAAATTGATTGCCTGTGAGCCGACATTGCCGGAGAAGACGGATGAAAGCCACCGGACACGTGCTCTTTTGGCCAGTGACGTATTCATCATGACCATTTACAAGGCTAAAAGTAAGCAGCGAACTGAGGAGCAGTTCCGGCAACTCGGCCTCTCCGCCGGATTCTCCGCCCTCCGACCATTTCATATCGATTACTTCTATTGTCTGTTGGAATTCACAAAGTGA 1116 52.69 MVVGKETAPMEQHNASTTADSEIQNKARLAILELANMISVPMSLNAIVRLNVADAIWQNGSNSPLSASEILARVVPSGGGDAHNLERILRMLTSYGVFEEHLSPNSSNHRYSLTDVGKTLVTDTDGLSYAPYVLQHHQDALMRAWPRVHEAAIDSTTEPFVRANGEPAYSYYGKKTEMNELMQRAMAGVSVPFMKAVLDGYDGFKGVEKLVDVGGSAGDCLRMILQKYPSIKEGINFDLPEVVARAPPIPGVSHVGGDMFKSIPTADAMFMKWVLSTWTDDECKIILENCCKSLPVGGKLIACEPTLPEKTDESHRTRALLASDVFIMTIYKAKSKQRTEEQFRQLGLSAGFSALRPFHIDYFYCLLEFTK 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 31193767 31196529 + MELO3C009403.2.1 Cme04g02466 326727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g02466 371 Pfam Dimerisation domain 42 93 IPR012967 GO:0046983
Cme04g02466 371 MobiDBLite consensus disorder prediction 1 20 - -
Cme04g02466 371 Pfam O-methyltransferase domain 151 353 IPR001077 GO:0008171
Cme04g02466 371 PIRSF O-mtase 8 371 IPR016461 GO:0008168
Cme04g02466 371 PANTHER O-METHYLTRANSFERASE 18 370 IPR016461 GO:0008168
Cme04g02466 371 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 125 369 IPR029063 -
Cme04g02466 371 SUPERFAMILY Winged helix DNA-binding domain 25 123 IPR036390 -
Cme04g02466 371 Gene3D - 13 125 IPR036388 -
Cme04g02466 371 Gene3D Vaccinia Virus protein VP39 126 371 IPR029063 -
Cme04g02466 371 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 32 371 IPR016461 GO:0008168
Cme04g02466 371 PANTHER OS02G0823400 PROTEIN 18 370 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g02466 Cme-Chr4:31193767 Cme07g01213 Cme-Chr7:16583356 3.08E-79 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g02466 - - csv:101205175 714.146