Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme04g02484 | ATGGATAGAGAGTGGGGGTCGAAGCCGGGAAGTGGAGGAGCGGCCTCTGCACAAAATGAAGCTATTGACCGTAGAGAGCGTCTTCGACGGCTTGCTCTCGAGACCATCGATCTCGCCAAGGATCCTTATTTTATGCGCAATCATCTTGGAAGCTATGAGTGTAAGCTTTGCTTGACTCTGCACAACAATGAGGGAAATTATTTGGCGCATACGCAGGGGAAGCGGCATCAGACTAATTTGGCCAAGAGAGCTGCCCGTGAAGCAAAGGAGGCTCCTGCTCAACCTCAACCCCACAAGAGGAAGGTCTCTGTTCGCAAAACAGGCATGCTTTTGTGCCCTTCTCCTTTATTTAAAATTGGAAGGCCCGGTTATCGAGTAACAAAGCAATTTGATTCTGAAACAAAGCAGCGATCTCTCCTTTTTCAGATTGAATATCCTGAAATTGAAGACCTAGCAAAGCCTAGGCATCGGTTTATGTCCTCTTACGAGCAGCGTGTGCAACCTTTTGACAAACGATACCAATATCTTCTGTTTGCAGCCGAACCATATGAGATAATTGCATTCAAGGTTCCAAGCACAGAGATAGACAAATCGACTCCAAAATTCTTTTCACACTGGGATCCGGACTCTAAAATGTTCACGTTGCAATTGTATTTCAAATCCAAGCCACAAGAGGCGAACAAGCCACCACCTGTACCTGCAGCAAATGGAACAGTGCCATCTGGTGCACCTCCAAGGCCACTGCCGCCACCACCACAAGCTCCACCACCGCCTCCACCTCCACCCCAGCAAGGAGCACCACCAAGAGTTCCTCCTCCTCCAATGCCAGGGTCCTTGCCGCCTCCACCTTCTGTAATGGCCAATGGTCCTCCTAGGCCGATGCCTCCTGGTGGGGCTCCGCCCATCCCTCCACCACCTCCAGTTGGCAATAATACAATGGCGAATTTCACTCCTGGTACTCAGATGAATAGGCCTCCTATGCCGCCTCCTCCACAGAGCTTCCCAGGTCAGGGTATCCGGCAGCCACCACCACCACCACCCAATATGGGATAG | 1053 | 50.9 | MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTGMLLCPSPLFKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG | 350 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 31292355 | 31295515 | - | MELO3C009381.2.1 | Cme04g02484 | 326745 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme04g02484 | 350 | Gene3D | Classic Zinc Finger | 46 | 89 | - | - | |
Cme04g02484 | 350 | SMART | ZnF_U1_5 | 49 | 83 | IPR003604 | GO:0003676|GO:0008270 | |
Cme04g02484 | 350 | SMART | CactinC_cactus_3 | 89 | 225 | - | - | |
Cme04g02484 | 350 | Gene3D | - | 113 | 228 | - | - | |
Cme04g02484 | 350 | SUPERFAMILY | beta-beta-alpha zinc fingers | 48 | 83 | IPR036236 | - | |
Cme04g02484 | 350 | MobiDBLite | consensus disorder prediction | 226 | 311 | - | - | |
Cme04g02484 | 350 | Pfam | Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) | 119 | 213 | IPR031781 | - | |
Cme04g02484 | 350 | MobiDBLite | consensus disorder prediction | 322 | 350 | - | - | |
Cme04g02484 | 350 | ProSiteProfiles | Zinc finger matrin-type profile. | 52 | 82 | IPR000690 | GO:0003676|GO:0005634|GO:0008270 | |
Cme04g02484 | 350 | PRINTS | Proline rich extensin signature | 224 | 245 | - | - | |
Cme04g02484 | 350 | PRINTS | Proline rich extensin signature | 245 | 261 | - | - | |
Cme04g02484 | 350 | PRINTS | Proline rich extensin signature | 264 | 281 | - | - | |
Cme04g02484 | 350 | PRINTS | Proline rich extensin signature | 286 | 311 | - | - | |
Cme04g02484 | 350 | MobiDBLite | consensus disorder prediction | 223 | 350 | - | - | |
Cme04g02484 | 350 | Pfam | Zinc-finger of C2H2 type | 52 | 76 | - | - | |
Cme04g02484 | 350 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Cme04g02484 | 350 | PANTHER | SPLICING FACTOR 3A SUBUNIT 2 | 1 | 344 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme04g02484 | K12826 | - | csv:101202831 | 501.13 |