Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme04g02488 | ATGCCGTTTCAAAGGATAGTTATCGCCGTGGGTCGGCCGGAGGAGGCCACCCATCCTGCCGCCCTGAAGGCCGCTTTGGCCGAGTTTATTTCTACTCTTATCTTCGTTTTTGCCGGCCAAGGTTCCGGTCTGGCTTTCTCTAAGCTCACTCATAATTCACCCACCACTCCGGCTGGCCTCATCATCGCCTCCATAGCTCATGGCTTTGCCCTTTTTGTCGGTGTCTCCACCGCCGCAAACATCTCCGGTGGACACCTTAACCCCGCCGTGACTTTCGGGGCCTTGCTCGGCGGTAACATCACTATCCTTCGCGGTATTCTTTATTGGATCGCTCAGCTCCTCGGCGCCGTCGTCGCTAACTTGTTGCTCAAGTTCGTCATCGTCGACGTGGCAATTACGGGATTCTTGCCAACAGCAGGGGTTGGAATATGGGAAGCATTTGTATTCGAGATTGTAATGACATTCGGTTTAGTCTACACTGTCTACGCCACCGCCATTGATCCCAAAAGAGGTGAACTGGGAGTCATTGCACCCATCGCCATCGGTTTAATCGTGGGCGCTAACATTTTGGTGGGCGGCCCATTCACCGGTGCCTCCATGAACCCTGCCGTCGCCTTCGGACCTGCCGTCATCTCTTGGTCTTGGGTTAACCATTGGATCTACTGGGCTGGCCCTCTCATCGGCGGCGGCTTAGCCGGCATTGTGTATGAACTGTTCTTCATTGGCTTCACCCACGAGCCTCTTCCGACTGCAGAGTACTGA | 762 | 54.72 | MPFQRIVIAVGRPEEATHPAALKAALAEFISTLIFVFAGQGSGLAFSKLTHNSPTTPAGLIIASIAHGFALFVGVSTAANISGGHLNPAVTFGALLGGNITILRGILYWIAQLLGAVVANLLLKFVIVDVAITGFLPTAGVGIWEAFVFEIVMTFGLVYTVYATAIDPKRGELGVIAPIAIGLIVGANILVGGPFTGASMNPAVAFGPAVISWSWVNHWIYWAGPLIGGGLAGIVYELFFIGFTHEPLPTAEY | 253 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 31313855 | 31315911 | + | MELO3C009377.2.1 | Cme04g02488 | 326749 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme04g02488 | 253 | PRINTS | Major intrinsic protein family signature | 23 | 42 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme04g02488 | 253 | PRINTS | Major intrinsic protein family signature | 67 | 91 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme04g02488 | 253 | PRINTS | Major intrinsic protein family signature | 104 | 123 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme04g02488 | 253 | PRINTS | Major intrinsic protein family signature | 149 | 167 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme04g02488 | 253 | PRINTS | Major intrinsic protein family signature | 182 | 204 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme04g02488 | 253 | PRINTS | Major intrinsic protein family signature | 219 | 239 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme04g02488 | 253 | CDD | MIP | 23 | 239 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme04g02488 | 253 | Gene3D | Glycerol uptake facilitator protein. | 6 | 248 | IPR023271 | - | |
Cme04g02488 | 253 | Pfam | Major intrinsic protein | 16 | 236 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme04g02488 | 253 | PANTHER | AQUAPORIN-8 | 7 | 253 | IPR034294 | - | |
Cme04g02488 | 253 | SUPERFAMILY | Aquaporin-like | 15 | 248 | IPR023271 | - | |
Cme04g02488 | 253 | PANTHER | AQUAPORIN TIP1-1 | 7 | 253 | - | - | |
Cme04g02488 | 253 | ProSitePatterns | MIP family signature. | 85 | 93 | IPR022357 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cme04g02488 | Cme08g01268 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme04g02488 | Cme-Chr4:31313855 | Cme12g01777 | Cme-Chr12:24357524 | 3.78E-94 | dispersed | |
Cme09g01523 | Cme-Chr9:20356405 | Cme04g02488 | Cme-Chr4:31313855 | 1.49E-58 | transposed | |
Cme04g02488 | Cme-Chr4:31313855 | Cme08g01268 | Cme-Chr8:9177803 | 5.88E-130 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme04g02488 | K09873 | - | csv:101222386 | 476.478 |