Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g02499 ATGGCAACCTCCGGCAACCCCTTCTGGCATCAGTTGTTCTTCGGGCGGTGGTTCTCTGCCTTTGCCTCCATTCTCATGATGTCCGTCTCCGGGGCCGCCTTCATCTTCTTCAAGGGCTTAGGTGGCAATGCCGGCGTCATCAGCGGCCTCATCAATGAGGTAGCTCCGACTTGGAGGATTCTTCTAATCGGCGCCGTCATGAACCTTTTTGGCTACACCATGATTTGGCTAGCCGTAACCAAACCGATCCCCAACCCCCAAATATGGCATATGTGTCTCTACATTTGCATCGGAGCTAATTCTCAGACCTTTGCAAATACAGGGGCTATTGTAACCTGCGTCAATAACTTCCCGGAAAGTCGTGGTAGTGTTTTGGGGCTATTGAAGGGTTACGTCGGCTTAAGCGGCGCCATTTTGTCCCAGCTTTACCATGCCTTTTATGGCAACAATTCCAAATCTTTTATCCTCTTAATCGCTTGGCTTCCCGCCGCCGTCATTGTTGTTTTCCTCCGTTTTGTTCGCATCATTAAGGATCTCCTGCAGCCCAACGAGAGAAAAATCGCAAACCCAATTTCACAACTAGAGTTAGCATCTCAACAACCACCGCCACGTATCTCGGCAGTGCCACTGAGCCCCCCCTCGGACTCCTGCTTTAAAAATATGTTTAAACCCCCAAACAGAGGAGAGGACTACACAATCCCACAAGCCATTTTCAGCGTCGATATGAAAATTCTTTTTATGGCCACAATCTGTGCTGTCGGTGGAACGTTGACGGCGATGGACAATTTGGGTCAAATCGGAGAGTCTTCGGGGTACCCATCTCAGAGTACCACCACATTCATCTCTCTGGTCAGCATATGGAATTACCTCGGCCGTGTAGTCTCCGGATTCGTATCGGAATATTTATGGAAAAAGTTCAAAGTCCCACGTCCTCCTCTATTTCTCTTCGGGACACTTATTATATCCTGCGTCGGCCATCTTCTAATCGCATTCGGAGTTCCAAATTCACTGTATTTTTCTCCAATCATAATTGGGTTCTGCTTTGGAGCGCAGTTGCCGTTGATCTTAGCAATCACATCGGAAATTTTTGGGTTGAAGTACTATGCGACTCTAAGCAATTTTGGAGTAGCGGCAAACCCTATTGGGACGTATATTATGAATGTGAAAGTGGTGGGTCATTTGTACGACAGGGAGGCTGAACGGCAGATGGAGGCAGCAGGGGGGAGAAGAAAAATAGGGGAGAGTTTGAGTTGCTTGGGAGTGGAGTGTTACAGAAAGGCATTTCTTATAATCACGGGGACGACGGTGTTGGGAGGAGTTGTTTCCTTAATTCTGGTGGTTCGATATTTATAA 1353 47.82 MATSGNPFWHQLFFGRWFSAFASILMMSVSGAAFIFFKGLGGNAGVISGLINEVAPTWRILLIGAVMNLFGYTMIWLAVTKPIPNPQIWHMCLYICIGANSQTFANTGAIVTCVNNFPESRGSVLGLLKGYVGLSGAILSQLYHAFYGNNSKSFILLIAWLPAAVIVVFLRFVRIIKDLLQPNERKIANPISQLELASQQPPPRISAVPLSPPSDSCFKNMFKPPNRGEDYTIPQAIFSVDMKILFMATICAVGGTLTAMDNLGQIGESSGYPSQSTTTFISLVSIWNYLGRVVSGFVSEYLWKKFKVPRPPLFLFGTLIISCVGHLLIAFGVPNSLYFSPIIIGFCFGAQLPLILAITSEIFGLKYYATLSNFGVAANPIGTYIMNVKVVGHLYDREAERQMEAAGGRRKIGESLSCLGVECYRKAFLIITGTTVLGGVVSLILVVRYL 450
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 31366366 31368028 + MELO3C009369.2.1 Cme04g02499 326760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g02499 450 Gene3D MFS general substrate transporter like domains 3 447 IPR036259 -
Cme04g02499 450 PANTHER MFS TRANSPORTER 6 36 - -
Cme04g02499 450 PANTHER MFS TRANSPORTER 210 448 - -
Cme04g02499 450 PANTHER MFS TRANSPORTER 36 188 - -
Cme04g02499 450 SUPERFAMILY MFS general substrate transporter 13 448 IPR036259 -
Cme04g02499 450 Pfam Nodulin-like 36 179 IPR010658 -
Cme04g02499 450 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 36 188 - -
Cme04g02499 450 CDD MFS_Mch1p_like 15 438 - -
Cme04g02499 450 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 6 36 - -
Cme04g02499 450 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 210 448 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g02499 Cme-Chr4:31366366 Cme08g01881 Cme-Chr8:22828895 3.74E-141 dispersed
Cme04g02496 Cme-Chr4:31347417 Cme04g02499 Cme-Chr4:31366366 4.48E-111 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g02499 - - csv:101216551 558.14