Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme04g02512 | ATGAGTTCATTCGCTAAGGCTAAAGTTGCAGCTGCCAAAATCTACCGTATAATTGACCATAAGCCTACTCTAAACCGCAACAACAAATCTGGTTTGGAATTAGAATCAGTTTCGGGACTGATTGAGCTGAAGAATGTTGATTTCGCATACCCATCAAGGCCAGATGTAAGAATCCTCAACAATTTCTCCCTAACTGTCCCTGCTGGAAAAACTATAGCTCTGGTTGGAAGCAGCGGCTCCGGCAAGAGCACGGTTGTTGCCCTAATTGAAAGATTCTATGACCCCAATTCAGGAGAAGTTCTACTAGACGGACGTGACATAAAAACTTTGAAGCTGAGATGGTTAAGACAGCAGATAGGATTGGTGAGCCAAGAACCTGCTCTTTTTGCTACCACCATCAAGGAGAATATTCTCTTAGGCAGACCTGAAGCAGACCAACTTGAGGTAGAGGAAGCTGCTCGAGTCGCCAATGCTCATTCATTCATTATCAAACTTCCTGAAGGCTATGACACTCAGGTTAGATAA | 525 | 43.81 | MSSFAKAKVAAAKIYRIIDHKPTLNRNNKSGLELESVSGLIELKNVDFAYPSRPDVRILNNFSLTVPAGKTIALVGSSGSGKSTVVALIERFYDPNSGEVLLDGRDIKTLKLRWLRQQIGLVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQVR | 174 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 31439048 | 31439721 | + | MELO3C009357.2.1 | Cme04g02512 | 326773 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme04g02512 | 174 | Pfam | ABC transporter | 59 | 153 | IPR003439 | GO:0005524 | |
Cme04g02512 | 174 | PANTHER | ABC TRANSPORTER B FAMILY MEMBER 1 | 1 | 173 | - | - | |
Cme04g02512 | 174 | Gene3D | ABC transporter type 1, transmembrane domain | 2 | 30 | IPR036640 | GO:0005524|GO:0016021 | |
Cme04g02512 | 174 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 32 | 173 | IPR027417 | - | |
Cme04g02512 | 174 | Gene3D | - | 31 | 173 | IPR027417 | - | |
Cme04g02512 | 174 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY B | 1 | 173 | IPR039421 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme04g02512 | Cme-Chr4:31439048 | Cme09g00570 | Cme-Chr9:5830550 | 6.58E-53 | dispersed | |
Cme04g02508 | Cme-Chr4:31424745 | Cme04g02512 | Cme-Chr4:31439048 | 1.86E-118 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme04g02512 | K05658 | - | csv:101220974 | 319.316 |