Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme04g02513 | ATGCTATTAGACGAGGCAACAAGTGCACTCGATGCCGAGTCAGAGCGATCAGTCCAGGAGGCACTCGACCGAGCTTGTTCAGGAAAAACCACAATCGTAGTTGCCCATCGACTATCAACTATCAGGAATGCTCATGTCATTGCAGTAATTGATGATGGCAAAGTTTCCGAACAGGGATCACACTCACATTTGTTGAAAAATTACCCTGATGGGTGTTACGCCAGGATGATTCAATTACAAAGATTCACACACAGCCAAGTCATTGGTATGACATCAGGTTCAACTTCCTCAGCAAGAACTAGAGAGGATGAGGAGAGAGATAGCTAG | 327 | 45.26 | MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGSHSHLLKNYPDGCYARMIQLQRFTHSQVIGMTSGSTSSARTREDEERDS | 108 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 31442971 | 31443551 | + | MELO3C009356.2.1 | Cme04g02513 | 326774 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme04g02513 | 108 | MobiDBLite | consensus disorder prediction | 89 | 108 | - | - | |
| Cme04g02513 | 108 | Gene3D | - | 1 | 87 | IPR027417 | - | |
| Cme04g02513 | 108 | PANTHER | ABC TRANSPORTER B FAMILY | 1 | 83 | - | - | |
| Cme04g02513 | 108 | PANTHER | BRACHYTIC2 | 1 | 83 | - | - | |
| Cme04g02513 | 108 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1 | 80 | IPR027417 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme04g02513 | Cme-Chr4:31442971 | Cme04g00136 | Cme-Chr4:1017562 | 2.18E-24 | dispersed | |
| Cme04g02513 | Cme-Chr4:31442971 | Cme09g00284 | Cme-Chr9:2201844 | 8.68E-23 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme04g02513 | K05658 | - | csv:101220974 | 210.305 |