Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g02533 ATGGCGACTAGGGGTCAAGGTGGTATCCAACAATTGCTTGCTGCGGAGCAAGAAGCTCAACACATTGTCAATGCTGCCAGAAATGCAAAATTGGCTAGACTGAAACAAGCCAAAGAAGAGGCTGATAAGGAAATTGCTGCATATCGTGCCCAAGTCGAGTCTGATTTCCAAAGAAAACTTGCTGAGAGTAGTGGAGATTCGGGAGCTAATGTTAAGCGGCTTGAAATCGAGACAGATGAAAAGATTTATCACCTGAAAGAAGAGTCTGCTAGAATTTCACAAGATGTTGTGAACATGCTCCTGAAGCATGTGACGACCGTGAAAAATTGA 330 43.64 MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEADKEIAAYRAQVESDFQRKLAESSGDSGANVKRLEIETDEKIYHLKEESARISQDVVNMLLKHVTTVKN 109
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 31585343 31587805 + MELO3C009336.2.1 Cme04g02533 326794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g02533 109 PANTHER V-TYPE PROTON ATPASE SUBUNIT G1 2 109 - -
Cme04g02533 109 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 1 108 IPR005124 GO:0016471|GO:0046961|GO:1902600
Cme04g02533 109 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 2 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Cme04g02533 109 Pfam Vacuolar (H+)-ATPase G subunit 6 108 IPR005124 GO:0016471|GO:0046961|GO:1902600
Cme04g02533 109 Coils Coil 24 51 - -
Cme04g02533 109 Gene3D - 1 109 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g02118 Cme-Chr3:28405336 Cme04g02533 Cme-Chr4:31585343 1.96E-39 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g02533 K02152 - csv:101216393 196.438