Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g02541 ATGGCGGCCAATAACCATTTGAGCTTTCTTCTTCTTCTTCTTCTCGCTCTTTTTCAGCTCTTTAATCCAGGAAGGGGGCAATTGGAAATGAATTATTATGCAAAAAGTTGTCCAAAAGCTGAAGAAATTATAAAGCAGCAAGTCGTTGATCTTTACTATGAACATGGAAACACTGCTGTTTCGTGGCTCAGAAATCTCTTCCATGATTGCATTGTTAAGTCTTGTGATGCATCACTGCTATTGGAGACGGTGGTGGGAGTGGAATCAGAGAAAGATTCAAGCAGAAGTTTTGGAATGAGAAATTTCAAATATGTAAATAAGATCAAAGCTGCTGTTGAAAAAGAATGTCCTCTCACTGTTTCTTGTGCTGACATCGTTGCTCTCTCCGCTAGAGATGGCATAGTTATGTTAAAGGGGCCTCATATAGATTTGAAAACCGGGAGAAAAGACAGCAAAATGAGTTATTCAAATATGGTTGAAGAGTTGGTTCCACAGCACAATGAATCTCTTGTAAATGTTCTCTCTCGCTTTAACTCCATTGGTATTGATACCGAAGCAACCGTCGCTCTTTTAGGAGCTCATTCAGTCGGTCGAGTTCACTGCGTAAACTTAGTAGAAAGACTATATCCAACGGCCGATCCTACCATTGATCCAGAATATGCCAAATACCTAAAGATGCGATGTCCAACACCAACTCCTGATCCAAACGCAGTGTTGTATTCAAGAAATGACCGTAAAACTCCAATGGTTCTCGATAACATGTACTATAGTAACATACTAAAACACAAAGGATTGCTCATAGTGGACCAAGAATTGGCTTCTAATCCTTTAACGTTACCTTATGTCAAGAAATTTGCTGCCGATAATGTCTATTTTCATGCACAATTCTCAAGGGGCATTCGTTTGTTATCAGAGAATAATCCTCTCACCGGAGATCAAGGAGAGATTAGGAAAGATTGTCGCTTTGTTAATAAGTAA 978 39.37 MAANNHLSFLLLLLLALFQLFNPGRGQLEMNYYAKSCPKAEEIIKQQVVDLYYEHGNTAVSWLRNLFHDCIVKSCDASLLLETVVGVESEKDSSRSFGMRNFKYVNKIKAAVEKECPLTVSCADIVALSARDGIVMLKGPHIDLKTGRKDSKMSYSNMVEELVPQHNESLVNVLSRFNSIGIDTEATVALLGAHSVGRVHCVNLVERLYPTADPTIDPEYAKYLKMRCPTPTPDPNAVLYSRNDRKTPMVLDNMYYSNILKHKGLLIVDQELASNPLTLPYVKKFAADNVYFHAQFSRGIRLLSENNPLTGDQGEIRKDCRFVNK 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 31630075 31633113 + MELO3C009329.2.1 Cme04g02541 326802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g02541 325 SUPERFAMILY Heme-dependent peroxidases 27 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cme04g02541 325 CDD secretory_peroxidase 27 323 IPR033905 GO:0004601|GO:0042744
Cme04g02541 325 PANTHER PEROXIDASE 21 15 322 - -
Cme04g02541 325 Gene3D Peroxidase, domain 2 164 303 - -
Cme04g02541 325 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme04g02541 325 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme04g02541 325 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme04g02541 325 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme04g02541 325 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme04g02541 325 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme04g02541 325 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme04g02541 325 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme04g02541 325 Pfam Peroxidase 45 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme04g02541 325 ProSiteProfiles Plant heme peroxidase family profile. 27 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme04g02541 325 PANTHER PEROXIDASE 25-RELATED 15 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme04g02541 325 Gene3D - 31 324 - -
Cme04g02541 325 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme04g02541 325 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme04g02541 325 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme04g02541 325 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme04g02541 325 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme04g02541 Cme08g02323 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g02541 Cme-Chr4:31630075 Cme07g01686 Cme-Chr7:22396550 1.68E-70 dispersed
Cme12g01489 Cme-Chr12:22519596 Cme04g02541 Cme-Chr4:31630075 4.23E-133 transposed
Cme04g02541 Cme-Chr4:31630075 Cme08g02323 Cme-Chr8:30160368 6.18E-152 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g02541 K00430 - csv:101215428 610.912