Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme04g02573 | GTGCAAGAAATTCCACCTCCGTCCTTGGATGCCACCGCCGAACAACCTCCCCTGTTTGATGGAACTACCAGGTTGTATACTGCTTACATTTGCCCTTATGCACACCGTGCTTGGATCATCCGAAATTACAAGGGACTACAACATAAAATTAAGTTAGTTCCTCTTGATCTTCGTAATAGGCCTGACTGGTATAAGGAAAAAGTATACCCAACGAACAAGGTTCCATCTCTGGAACATAATGGAAAGGTTATTGGAGAAAGTCTTGATCTGCTCAAATATATCGATAGCAACTTTGAAGGACCTTCTCTTCTCCCAGATGATCCTGCTAAAAGAGAATTTGCTGAAGAGTTGCTTTCCTACAGCGAAACATTTAACGGCGCTATAATCAATTCATTTAAAGGCGACACCGCAAAGGAAGCATGTAAAACTTTTCAACTTGATCGCTCTCTTCGAACAGATGTGGATATAGCATACATTCCATTTGTTGAAAGGTTCCACATTTTCTTATCAGAGGCTCTCAAGATTGACGTCACGGAAGGAAGGCCCAAATTAGTTGCATGGATGGAGGAGTTCAATAAGATTGACGCGTACAAGCAAACAAAAGTCGATCCCGAGCTGAGCTAG | 624 | 42.31 | VQEIPPPSLDATAEQPPLFDGTTRLYTAYICPYAHRAWIIRNYKGLQHKIKLVPLDLRNRPDWYKEKVYPTNKVPSLEHNGKVIGESLDLLKYIDSNFEGPSLLPDDPAKREFAEELLSYSETFNGAIINSFKGDTAKEACKTFQLDRSLRTDVDIAYIPFVERFHIFLSEALKIDVTEGRPKLVAWMEEFNKIDAYKQTKVDPELS | 207 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 31818562 | 31821562 | - | MELO3C031023.2.1 | Cme04g02573 | 326834 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme04g02573 | 207 | Gene3D | Glutaredoxin | 1 | 99 | - | - | |
| Cme04g02573 | 207 | ProSiteProfiles | Glutaredoxin domain profile. | 11 | 111 | - | - | |
| Cme04g02573 | 207 | PANTHER | GLUTATHIONE S-TRANSFERASE L1 | 1 | 205 | IPR044629 | GO:0004364 | |
| Cme04g02573 | 207 | Gene3D | - | 100 | 207 | - | - | |
| Cme04g02573 | 207 | PANTHER | GLUTATHIONE S-TRANSFERASE L2, CHLOROPLASTIC | 1 | 205 | - | - | |
| Cme04g02573 | 207 | Pfam | Glutathione S-transferase, N-terminal domain | 25 | 101 | IPR004045 | - | |
| Cme04g02573 | 207 | SUPERFAMILY | GST C-terminal domain-like | 98 | 205 | IPR036282 | - | |
| Cme04g02573 | 207 | SUPERFAMILY | Thioredoxin-like | 16 | 103 | IPR036249 | - | |
| Cme04g02573 | 207 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 21 | 102 | IPR004045 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme04g02573 | Cme-Chr4:31818562 | Cme04g02576 | Cme-Chr4:31833175 | 4.21E-107 | dispersed | |
| Cme04g02573 | Cme-Chr4:31818562 | Cme04g02575 | Cme-Chr4:31828183 | 2.77E-117 | proximal | |
| Cme10g00831 | Cme-Chr10:5513245 | Cme04g02573 | Cme-Chr4:31818562 | 8.64E-91 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme04g02573 | K00799 | - | csv:101210504 | 377.481 |