Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g02576 TACAGAAAAACTGTCGTACCTGAAGTTCGTCCCCCGTCATTGGAAGCCGACGCCGAACAACCTCCGCTCTTCGACGGAACCACCAGGTTATATATGGCTTACTATTGCCCATTTGCACAACGAGCTTGGATCACAAGAAATTACAAGGGATTACAAGATAAAATTAAATTAGTGCCTCTAAACCTTCAGAACAGGCCTGCTTGGTATAAGGAAAAAGTGAACCCTACAAACAAGGTGCCAGCGTTGGAACACAATGGGAAAGTTATTGGAGAAAGCCTTGATTTGATCAAATACATAGATAGCAACTTTGAAGGCCCTTCTCTTTTCCCAGATGATGCTGCTAAAAGACAATTTGGTGAAGAGTTGATAGCTTATACCGATACATTCACTGGGGCAGTGTACCCTTCATTTAAGGGTGACCCAGCAAAGGAAGCAGGTCCTCAGTTTGATTACTTGGAGAATGCTCTGCAAAAATTTGATGATGGACCATTCCTTTTAGGTCAATTCAGTGGGGTGGACATTGCATATATTACATTTATCGAAAGATTTCATGTATTTTTAAACGAGGTTTTCAAGTATGATATCACAGAAGGAAGGCCTCATCTAGCTACATGGATTGAGGAATTCGACAAGATTGATGCTTACAAGCAAACAAAATATGACCCTACCGCGATTGTTGAACTTTACAAGAAGCGCTTTATGGTTTAA 708 40.96 YRKTVVPEVRPPSLEADAEQPPLFDGTTRLYMAYYCPFAQRAWITRNYKGLQDKIKLVPLNLQNRPAWYKEKVNPTNKVPALEHNGKVIGESLDLIKYIDSNFEGPSLFPDDAAKRQFGEELIAYTDTFTGAVYPSFKGDPAKEAGPQFDYLENALQKFDDGPFLLGQFSGVDIAYITFIERFHVFLNEVFKYDITEGRPHLATWIEEFDKIDAYKQTKYDPTAIVELYKKRFMV 235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 31833175 31836215 - MELO3C009299.2.1 Cme04g02576 326837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g02576 235 SFLD Main (cytGST) 29 209 - -
Cme04g02576 235 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
Cme04g02576 235 SUPERFAMILY Thioredoxin-like 20 108 IPR036249 -
Cme04g02576 235 CDD GST_C_Lambda 112 230 - -
Cme04g02576 235 Pfam Glutathione S-transferase, C-terminal domain 149 207 - -
Cme04g02576 235 Gene3D Glutaredoxin 2 104 - -
Cme04g02576 235 Gene3D - 105 235 - -
Cme04g02576 235 SFLD Glutathione Transferase (cytosolic) 29 209 IPR040079 -
Cme04g02576 235 PANTHER GLUTATHIONE S-TRANSFERASE L2, CHLOROPLASTIC 4 234 - -
Cme04g02576 235 PANTHER GLUTATHIONE S-TRANSFERASE L1 4 234 IPR044629 GO:0004364
Cme04g02576 235 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
Cme04g02576 235 SUPERFAMILY GST C-terminal domain-like 103 233 IPR036282 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g02573 Cme-Chr4:31818562 Cme04g02576 Cme-Chr4:31833175 4.21E-107 dispersed
Cme04g02576 Cme-Chr4:31833175 Cme10g00831 Cme-Chr10:5513245 4.95E-111 dispersed
Cme04g02575 Cme-Chr4:31828183 Cme04g02576 Cme-Chr4:31833175 1.88E-128 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g02576 K00799 - csv:101210004 471.47