Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g02644 ATGGCGAACCTCTGTTTCTTTTCTTTCTTCGCCATTTTCTTCTTGACTGTCCCAGCCGCATCTCAGAAGTTCTTCTACGCCGGTTTTCGCGACCCCAACGCAGCCACCAACTTATCCCTACCGGATATCGCCAAAATCGAAGAGAACGGACTCTTAATCCTCACAAACGATGCCGGATTTACACAGGGCCATGTGTTCTACGAATCCCCTGTTCGCTTTAAAAAGTCTTCCAACGCCAATTCTTTTTCCTTCTCTACCACTTTTGTTTTCGCCATTGTCACCGAATTACCGAGTCTTGGTAGCCATGGCCTCGCCTTCACTATTGCGCCGTCCAAAAACCTCCATGCGTCTCCCTCTCAGTATTTAGGCCTTCTCAATGTGACCAGTCTCGGAGACCCCTCGAACCATTTATTTGCCATTGAATTGGACACCTTTCAAAATTTAGAGTTTGAGGACATTGACGACAACCACATTGGAGTTAATCTCAATAGTATGATCTCCACTGCCTCCACTACAGCCTCTTATTTCATTAACGACGGGAATACCAAGCAATATATAAACCTAAAAAGTGGGGCACCAATTCAAGTTTGGATTGATTATGATGCCCCTGTAAATTCCCTCACGGTGGCCCTTTCTCCGTTTTCCACCAAACCCCAGAAGCCAATTCTTTCGTTTAATGTGGATCTCTCTCCGATTCTTTTGGAGTTCATGTACATTGGGTTCTCAGCCGCCACGGGCTCTATTTCAAGTTCTCATTATCTTTTAGGTTGGAGTTTCAGTATGGATGGACCGGCCCAGTCACTGGATATTGATTCTCTGCCTTCGGTTCCCGGGCCGAAGAATACATACTCTGATTTAGCAATTGGGATTTCAATTGTCATCATTTTGATTGTCATAACTGGAATCTTTCTTACTCTTTACAAAATCACAAAGAAGGTAGACATAATCGAAGCCTGGGAGCTTGAAATTGGACCGCATCGGTACCCTTACAAAGAACTGGAACTAGCAACGAAACAATTCAGCAACAGAGAGCTACTAGGACGTGGCGGATTTGGAAAAGTTTATAGAGGAACATTGCCAAATTCAAAAACCCACGTCGCTGTGAAGCGAATTTCCCACGAATCCAAGCAGGGCCTCCGTGAATTTATGTCGGAAATCACAATCATTGGTCGGCTTCGTCACCGGAACTTGGTTCAATTACTGGGATGGTGTCGTCATGGTGGCAATGAAGATCTGCTTCTTGTTTATGAGTTTATGGCAAATGGGAGTTTGGATAGTTACATATTCGGCAAACCAAAAGTGATTTTGAGTTGGAAACAAAGGGTTAAGATCATAAACGGCGTTGCTTCCGGCCTCCTATACTTGCACGAAGGATACGAACAGGTGGTCATTCATCGAGATGTGAAAGCCAGCAATGTTTTACTCGACAACGAGATGAACGGAAAACTAAGCGATTTCGGGCTCGCCAAACTCTACGAACACGGCGAGAACCCGACAACGACACGGGTCGTCGGAACTGTCGGCTACCTGGCGCCGGAGCTGCACAGAACCGGAAAAGCCACAACCAGCTCTGATGTTTACGCGTTCGGCGCACTCGTGCTTGAAGTGGCCTGCGGCCGCCGGCCGATCGGCTCGAGGGCGGTGCCGGAGGAGATAGTGCTGGTGGATTGGGTTTGGGAGAAGTACAGAGAGAGAAAATTACTGGAAGTAATGGACGAGAAATTGAAGGGGGATTTCAATGAGGCTGAGGCAGTGATGATTTTGAAATTGGGGTTGCTCTGTTCGAAGGATTCGGCGGCGGCGCGGCCGAGTATGCGTCTTGTGATGCGGTGTTTGGACGGTGAGATTGGAGTTCCCGACGAGATTACGGATCCGAGAATGGTGGAAGGAGTTGATGAATTTGTGGATTCGTGGAGTGAAAACAGAGACATCAGTTTTGCTTCTTTATCCACTTCGTCTCTTTCGATTCTCGACGGTAGAAGTTGA 1986 47.08 MANLCFFSFFAIFFLTVPAASQKFFYAGFRDPNAATNLSLPDIAKIEENGLLILTNDAGFTQGHVFYESPVRFKKSSNANSFSFSTTFVFAIVTELPSLGSHGLAFTIAPSKNLHASPSQYLGLLNVTSLGDPSNHLFAIELDTFQNLEFEDIDDNHIGVNLNSMISTASTTASYFINDGNTKQYINLKSGAPIQVWIDYDAPVNSLTVALSPFSTKPQKPILSFNVDLSPILLEFMYIGFSAATGSISSSHYLLGWSFSMDGPAQSLDIDSLPSVPGPKNTYSDLAIGISIVIILIVITGIFLTLYKITKKVDIIEAWELEIGPHRYPYKELELATKQFSNRELLGRGGFGKVYRGTLPNSKTHVAVKRISHESKQGLREFMSEITIIGRLRHRNLVQLLGWCRHGGNEDLLLVYEFMANGSLDSYIFGKPKVILSWKQRVKIINGVASGLLYLHEGYEQVVIHRDVKASNVLLDNEMNGKLSDFGLAKLYEHGENPTTTRVVGTVGYLAPELHRTGKATTSSDVYAFGALVLEVACGRRPIGSRAVPEEIVLVDWVWEKYRERKLLEVMDEKLKGDFNEAEAVMILKLGLLCSKDSAAARPSMRLVMRCLDGEIGVPDEITDPRMVEGVDEFVDSWSENRDISFASLSTSSLSILDGRS 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 32186021 32188225 - MELO3C009238.2.1 Cme04g02644 326905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g02644 661 Gene3D Transferase(Phosphotransferase) domain 1 419 624 - -
Cme04g02644 661 Pfam Legume lectin domain 22 273 IPR001220 GO:0030246
Cme04g02644 661 SMART serkin_6 340 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme04g02644 661 ProSiteProfiles Protein kinase domain profile. 340 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme04g02644 661 Gene3D Phosphorylase Kinase; domain 1 326 418 - -
Cme04g02644 661 CDD STKc_IRAK 346 614 - -
Cme04g02644 661 PANTHER - 6 634 - -
Cme04g02644 661 Pfam Protein tyrosine and serine/threonine kinase 343 611 IPR001245 GO:0004672|GO:0006468
Cme04g02644 661 Gene3D - 20 262 - -
Cme04g02644 661 CDD lectin_legume_LecRK_Arcelin_ConA 23 263 IPR001220 GO:0030246
Cme04g02644 661 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 6 634 - -
Cme04g02644 661 SUPERFAMILY Concanavalin A-like lectins/glucanases 20 279 IPR013320 -
Cme04g02644 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Cme04g02644 661 ProSitePatterns Protein kinases ATP-binding region signature. 346 369 IPR017441 GO:0005524
Cme04g02644 661 SUPERFAMILY Protein kinase-like (PK-like) 322 641 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme04g02644 Cme08g02425 CCT
Cme04g02644 Cme08g02425 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g02644 Cme-Chr4:32186021 Cme08g02425 Cme-Chr8:31155081 0 dispersed
Cme04g02643 Cme-Chr4:32182873 Cme04g02644 Cme-Chr4:32186021 0 tandem
Cme04g02644 Cme-Chr4:32186021 Cme04g02645 Cme-Chr4:32188876 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64851 PF07714 PK_Tyr_Ser-Thr 2.90E-47 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g02644 - - csv:101204442 1161.75