Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g02645 ATGGTCCGTCTCTGTTTACTTTGTTTCTTCTTCTTCTTCCTCTTTCTCGCTGCCCCCGCCGCATCTCAGCAGCTCTACTTCTCCGGATTTCAAGATGACGCTGCCGTCGCCGCCAACTTAACTCTCACTGACATCGCCAAGATCGAGCAGAACGGAATCTTGAAACTGACAAATGATACCAGTCGATTACAGGGTCATGCCTTTTACAGTTCCCCTGTTCGTTTCAAAAACTCCTCCGACGGTAAAGTTTTTTCGTTCTCCACTGCTTTTGTCATCGCCGTCGTCCCCGAGTACCCGACTCTAGGCGGCCATGGCCTCGCCTTCACCATCGCCCGATCGAAGAACCTCCGTGGACTTCCCAGTCAGTATTTAGGCCTTCTCAATGCGACAGACGTCGGAAACTTCACGAACCATCTCTTCGCCGTTGAGTTCGACACTGTTCAAGATTTTGAGTTTGCCGATATCAACGATAACCACGTCGGAATTAATCTCAACCATATGGTTTCTAATGTCTCCACCACCGCTTCCTATTTCGTCGACGATGGACCCACCAAGCAGAACCTGACCTTAAAAAGTGGGAGGCCGATTCAAGCTTGGGTCGATTACGATTCCTCTGTGAATTCTCTCACGGTGGGACTTTCTCCGTTTTCCACCAAACCCAAGAAGCCGATTCTGTCGTTTAATGTAGATCTCTCTCCGATTCTTGAGGAGTTTATGTATGTTGGGTTCTCGGCCTCCACTGGGCTTCTTGCAAGTTCGCACTATGTGTTGGGGTGGAGTTTCAGTATGAATGGACAAGCCCGGTCTCTGGATCTGTCTTCTTTGCCTTCTGTTCCAGGTCCGAAGAAAAAGCACACTGCTTTTACAATTGGGGTTTCTGTTGCGGCTGTTTTGATTGTGATAATCGCGATTTGTGTTGCTGTTTTAATCATTTGGAAGATAAAAAACGCTGATATAATCGAGGCCTGGGAGCACGAAATCGGTCCTCATCGGTACTCTTACAAGGAGCTCAAGAAAGCCACTAAGCGATTTAGGGATAAAGAGCTTCTAGGGCGCGGTGGGTTTGGGAAAGTTTACAAGGGGACTTTGCCGAATTCGAAAATCCAAGTGGCTGTGAAGCGAATTTCTCACGAATCGAAGCAGGGCCTAAGGGAATTTGTGTCGGAAATCGCTAGCATTGGCCGGCTTCGTCACCGGAACTTGGTTCAGTTGCTGGGATGGTGTCGCCGCCGTGGCGATCTGCTTCTTGTTTATGATTTTATGGCTAATGGGAGCTTGGATAACTACATTTTCGACGACCCGGATGTGAATTTGAGCTGGCAACAGAGATTTAGAATCATTAAGGGGGTCGCTTCCGGTTTGCTCTACTTGCACGAAGGCTACGAGCAGGTGGTGATTCATAGAGATGTGAAAGCCAGTAATGTCCTGCTCGACAGCGAGATGAATGGGAAGCTTGGCGATTTCGGCCTCGCTCGGCTATATGAACACGGGGCCAACCCAAGCACGACTCGGGTCGTCGGAACTCTGGGATATTTGGCACCGGAGCTGCCCAGAACCGGGAAAGCCACCACCAGCTCAGATGTGTATGCCTTCGGCGCACTTCTGCTAGAAGTGGCCTGCGGGCGGCGGCCAATCGACCCAAAATCTTCGTCGGAAGAGCTGGTGCTGGTGGATTGGGTATGGGAGAATTACAGGGAAGGGAAATTGCTGGAGGTAATGGATCCAAAATTGAAAGGGGATTTCAATGTAGCTGAGGCAGTGATGATATTGAAACTGGGGTTGTTTTGTTCGAACGATTCCGCGGCAGCACGGCCGAGTATGAGGCAGGTGGTGATGTTTCTGGAGGGAGAGATCGGAGTTCCGGAGGAGATATCAGCGCCGAAAGTGATGGAAGGAGGGAGGAATGGAGAAGGGTTCGATGATTTTGTGAATTCGTTTGCTTCTTCTTCGTTTAACAAGTTCAGTTCATATTCATCGACTGGTAATAGGGATATGGATATGAGTTTTGCTTCATTTTCAACTTCTCCTCTTTCGCTTCTCAATGGCAGAGACTAA 2055 49.2 MVRLCLLCFFFFFLFLAAPAASQQLYFSGFQDDAAVAANLTLTDIAKIEQNGILKLTNDTSRLQGHAFYSSPVRFKNSSDGKVFSFSTAFVIAVVPEYPTLGGHGLAFTIARSKNLRGLPSQYLGLLNATDVGNFTNHLFAVEFDTVQDFEFADINDNHVGINLNHMVSNVSTTASYFVDDGPTKQNLTLKSGRPIQAWVDYDSSVNSLTVGLSPFSTKPKKPILSFNVDLSPILEEFMYVGFSASTGLLASSHYVLGWSFSMNGQARSLDLSSLPSVPGPKKKHTAFTIGVSVAAVLIVIIAICVAVLIIWKIKNADIIEAWEHEIGPHRYSYKELKKATKRFRDKELLGRGGFGKVYKGTLPNSKIQVAVKRISHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLLLVYDFMANGSLDNYIFDDPDVNLSWQQRFRIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSEMNGKLGDFGLARLYEHGANPSTTRVVGTLGYLAPELPRTGKATTSSDVYAFGALLLEVACGRRPIDPKSSSEELVLVDWVWENYREGKLLEVMDPKLKGDFNVAEAVMILKLGLFCSNDSAAARPSMRQVVMFLEGEIGVPEEISAPKVMEGGRNGEGFDDFVNSFASSSFNKFSSYSSTGNRDMDMSFASFSTSPLSLLNGRD 684
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 32188876 32191639 - MELO3C009237.2.1 Cme04g02645 326906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g02645 684 Gene3D - 22 264 - -
Cme04g02645 684 CDD lectin_legume_LecRK_Arcelin_ConA 27 265 IPR001220 GO:0030246
Cme04g02645 684 SUPERFAMILY Protein kinase-like (PK-like) 325 627 IPR011009 -
Cme04g02645 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Cme04g02645 684 ProSiteProfiles Protein kinase domain profile. 344 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme04g02645 684 PANTHER - 8 672 - -
Cme04g02645 684 Pfam Legume lectin domain 24 275 IPR001220 GO:0030246
Cme04g02645 684 Gene3D Transferase(Phosphotransferase) domain 1 421 629 - -
Cme04g02645 684 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 8 672 - -
Cme04g02645 684 SMART serkin_6 344 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme04g02645 684 CDD STKc_IRAK 350 616 - -
Cme04g02645 684 ProSitePatterns Protein kinases ATP-binding region signature. 350 373 IPR017441 GO:0005524
Cme04g02645 684 Pfam Protein kinase domain 345 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme04g02645 684 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 283 IPR013320 -
Cme04g02645 684 Gene3D Phosphorylase Kinase; domain 1 329 420 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g02010 Cme-Chr2:26316302 Cme04g02645 Cme-Chr4:32188876 2.34E-168 dispersed
Cme04g02248 Cme-Chr4:29577139 Cme04g02645 Cme-Chr4:32188876 3.07E-117 dispersed
Cme04g02643 Cme-Chr4:32182873 Cme04g02645 Cme-Chr4:32188876 0 dispersed
Cme04g02645 Cme-Chr4:32188876 Cme08g02425 Cme-Chr8:31155081 0 dispersed
Cme06g02769 Cme-Chr6:34941554 Cme04g02645 Cme-Chr4:32188876 1.36E-134 dispersed
Cme04g02644 Cme-Chr4:32186021 Cme04g02645 Cme-Chr4:32188876 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64852 PF00069 Pkinase 8.50E-46 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g02645 - - csv:101223168 1278.46