Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g02743 ATGGACATGGATACCGACGAAAATTCGAATGCCAAAGGAAAGGAAGGGCAAGGGAAGCTCATAATGGTTATATTAGTGGGTGCACCTGGAAGCGGCAAGTCCACCTTTTGCGAACTTGTTATGGGTTCCTCTTCTCGCCCTTGGGTTCGGATCTGTCAGGATACCATTGGAAATGGCAAGTCTGGAACCAGAGCACAGTGCTTGAAGAGTGCAACAAGTGCACTGAATGATGGAAAGAGTGTATTTGTGGACAGGTGCAATCTTGAAATAGAGCAGCGTGCTGATTTTGTGAAGCTCGGGGGCCCTCAAGTGGATGTACATGCTGTTGTATTAGATCTCCCTGCTCAGCTCTGTATCTCTCGTTCTGTTAAGCGGACTGGTCATGAAGGGAACTTATCAGGTGGAAAAGCTGCTGCTGTTGTGAATAAAATGCTGCAAAAGAAAGAATTGCCCAAACTTAATGAAGGGTTCACTCGCATAACCTTTTGCCACAATGAGAGCGACGTTCTATCCGCTATAGATATGTACAAATCGCTTGATTTACATAATATGCTTCCACATGGATGTTTTGGACAGAAGAACCCAGACAAGAAAGTACAACTTGGCATAATGAAGTTCTTGAAGAAAGCAGAAAACCCTTCAAAAACGTGTTCTAGTGCCAATGCCGACAAGAATTCTCCAACTCCTCAACCTACCCAGGAAAAGAGGGAGTCTTGTGATAAAAAGGAAGAGTCTTCCTGCAGAATGTCAAGGAATGTAGCTATGGAGTCGGAGAAAGGTGAAAGTCCAGGCGTTAGATCCTTAGAAGGCAAGATTTCTCAAAGTGATCCACCAACTCTTGCATTCCCATCTATTTCGACTTCAGATTTCAAGTTTAGCCATGAGAAGGCTGCTGAAATTATTGTTGAAAAGGTTGAAGAATTCATGGATAAGCTTGGAAACGCCAGACTCGTACTGGTAGACTTGAGTCATGGATCAAAGATATTGTCGATGGTTAAAGCTAAAGCAACCGAGAAAAATATTAGTTCCACCAAGTTTTTCACATTCGTAGGTGATATAACTAAACTCAATTCCGAAGGTGGATTGCGCTGCAATGTTATAGCCAATGCTGCAAACTGGCGACTGAAACCGGGAGGTGGTGGTGTGAATGCTGCGATTTTTAGTGCTGCAGGCCCTGGTCTGGAAGTGGCGACTAAACAACAAGCAAACTCCCTTCATCCTGGCAATGCCGTGGCTGTTCAGTTGCCTTCAACTTCTCCTTTGTTAAATAGGGAAGGAGTAACCCATGTCATACATGTTCTTGGACCCAACATGAATCCACAAAGGCCAAATTATCTCAACAATGACTATGATGAAGGTTGCAAGCTTCTTGGCAATGCTTACTCTTCCCTATTTCAGGCCTTTATTTCAATCGTACAAGACAAATATAAGTCGGTTAAGGGAATTAATGAATGCCTCGGCTCAACACCTCCAGAACCACAAAAGCACTCCGAGAACAGTCATCACAAGTTTAAGAGAGAGAATTTGCAAAATCTTGAAATAAGCAAAAAATGGAAAGGATCTCATAACTCAACCGAAGGATTAAACCAAAACAACAATAAGACTGTCCCCAAAAAGAGTAAGCACTGGGGTTCATGGGCACAAGCACTTTATGACACTGCAATGCATCCCGAGCGACATACCAATTCTGTACTAGAGACATCAGATGATGTTGTAGTACTGTATGATATTTATCCGAAGGCACGCAAGCATCTTTTAGTCGTGGCTCGGCATGAAGGCCTCGATCAACTAGCCGACGTATGTACAGAACACCTTCCATTGTTGAGGACAATGCACGCTATGGGTTTGAAGTGGATCCATAAGTTCTTTCATGAAGATGCACCATTGGTCTTTCGCCTTGGATACCACTCGGCTCCATCAATGAGGCAGCTGCACCTACATGTTATAAGCCAGGATTTCGATTCCACTCATCTGAAAAACAAGAAGCACTGGAATTCTTTCAACACCGATTTCTTCAGAGACTCGGTGACCGTTATAGACGAAGTCAGTAGCCATGGAAAGGCGAGGATCATGGACGACGAGAGATTGATATCTATGGAGTTACGTTGCAACAGATGCAGAAGTGCTCATCCCAACTTACCCAAATTGAAAGCGCATATTTCCAAATGCCAAGCGCCTTTCCCTTCCACACTGCTTGAGGACGGTCGTTTAGTCGTTGAGCCAAGCAATGCTCCTCTTTCTTAG 2244 43.94 MDMDTDENSNAKGKEGQGKLIMVILVGAPGSGKSTFCELVMGSSSRPWVRICQDTIGNGKSGTRAQCLKSATSALNDGKSVFVDRCNLEIEQRADFVKLGGPQVDVHAVVLDLPAQLCISRSVKRTGHEGNLSGGKAAAVVNKMLQKKELPKLNEGFTRITFCHNESDVLSAIDMYKSLDLHNMLPHGCFGQKNPDKKVQLGIMKFLKKAENPSKTCSSANADKNSPTPQPTQEKRESCDKKEESSCRMSRNVAMESEKGESPGVRSLEGKISQSDPPTLAFPSISTSDFKFSHEKAAEIIVEKVEEFMDKLGNARLVLVDLSHGSKILSMVKAKATEKNISSTKFFTFVGDITKLNSEGGLRCNVIANAANWRLKPGGGGVNAAIFSAAGPGLEVATKQQANSLHPGNAVAVQLPSTSPLLNREGVTHVIHVLGPNMNPQRPNYLNNDYDEGCKLLGNAYSSLFQAFISIVQDKYKSVKGINECLGSTPPEPQKHSENSHHKFKRENLQNLEISKKWKGSHNSTEGLNQNNNKTVPKKSKHWGSWAQALYDTAMHPERHTNSVLETSDDVVVLYDIYPKARKHLLVVARHEGLDQLADVCTEHLPLLRTMHAMGLKWIHKFFHEDAPLVFRLGYHSAPSMRQLHLHVISQDFDSTHLKNKKHWNSFNTDFFRDSVTVIDEVSSHGKARIMDDERLISMELRCNRCRSAHPNLPKLKAHISKCQAPFPSTLLEDGRLVVEPSNAPLS 747
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 32737121 32740957 - MELO3C009144.2.1 Cme04g02743 327004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g02743 747 PANTHER APRATAXIN-RELATED 20 743 - -
Cme04g02743 747 SUPERFAMILY Macro domain-like 278 315 IPR043472 -
Cme04g02743 747 Pfam Scavenger mRNA decapping enzyme C-term binding 556 663 - -
Cme04g02743 747 Gene3D Leucine Aminopeptidase, subunit E, domain 1 226 325 IPR043472 -
Cme04g02743 747 PANTHER APRATAXIN 20 743 IPR026963 GO:0003677|GO:0006281|GO:0033699
Cme04g02743 747 MobiDBLite consensus disorder prediction 214 233 - -
Cme04g02743 747 Pfam Macro domain 368 451 IPR002589 -
Cme04g02743 747 Gene3D Leucine Aminopeptidase, subunit E, domain 1 326 479 IPR043472 -
Cme04g02743 747 SUPERFAMILY HIT-like 533 707 IPR036265 -
Cme04g02743 747 MobiDBLite consensus disorder prediction 214 279 - -
Cme04g02743 747 ProSitePatterns HIT domain signature. 632 650 IPR019808 -
Cme04g02743 747 Gene3D - 545 726 IPR036265 -
Cme04g02743 747 Pfam C2HE / C2H2 / C2HC zinc-binding finger 668 722 IPR032566 -
Cme04g02743 747 Gene3D - 3 177 IPR027417 -
Cme04g02743 747 SUPERFAMILY Macro domain-like 327 467 IPR043472 -
Cme04g02743 747 ProSiteProfiles Macro domain profile. 333 586 IPR002589 -
Cme04g02743 747 Pfam AAA domain 22 144 - -
Cme04g02743 747 MobiDBLite consensus disorder prediction 520 539 - -
Cme04g02743 747 MobiDBLite consensus disorder prediction 234 249 - -
Cme04g02743 747 ProSiteProfiles HIT domain profile. 550 658 IPR011146 GO:0003824
Cme04g02743 747 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 165 IPR027417 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g02743 K10863 - csv:101216867 1448.72