Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme05g00010 ATGAGTCAAAAGGGAGGCTTCGATTCAGAATCTCTTGCAACCTTATGGGTGTTGTGCACAGCTCTAGCTCTAGCTCTAACTCCAATTGTTGGATCAGTTTCATCTCCAACGCACCAGTTCCGTGGAATTTCTCCTCAAGATGAGATGTATTACAAGTCGTCCGACATGATCAAATGTAGAGACGGTTCGAAAAAATTTTCCAAGGCTCAGCTTAACGATAACTTCTGCGATTGCCCTGATGGCACTGATGAACCTGGCACATCTGCATGCTCGAATGGGAAGTTCTATTGTCGAAATGCAGGGCACGCTCCACTTTTGTTGTTTTCTTCAAGGGTGAACGACAATATTTGTGATTGTTGTGATGGAAGTGACGAATATGACAGCGAAGTCAAATGTCCAAATACGTGTTGGGAAGCTGGGAAAGTGGCAAGAGATAAATTGAAGAAAAAGATTTCAACCTTTGAAGAGGGTGTTAAAATTAGAAAACAAGATGTTGAACATGCAAAAAATGCAATAATCAAAGATGAGGCAGAGCTATTGGAGTTGAAAAACGAGGAAAAAGTATTAAAAGGGCTCGTTGAACAACTCAAAGAGCGCAAAGAGCAAATCGAGAAGGTAGAAGAGGAGGAGCGATTATTGAAAGAAAAAGAAGCAAAGAAACATTTGGAGAGAGAAAAAGATGAGACTAGAAAAATTGAGTCAACAGAAACAACTGATATTGGGGAAAGCAAAACTCACGAGGAAGACAATTGGAAGAAAAATGAAGCTACAGAAAATTATGACAAGGTGTATAAACAAGGAGAAGGCAGCGATGATGATAAAATTGGTAACTGGGATGACTCTGCTTCAGATCAGGCTAGGATGGAAGAAGTTGATTCAGAACTCGAAGCTCACCTTTCTAATAAACCTGAAACAGAAGCATCATTGACGAAAGAGGTAGAAGAGGATACAGCAGTAGAGAAGGACCCGCTGGCTAAATCTGAAACTGGAGAAAGTGCTGGCACTAAAGAATCATCAGAAGAAGTCCTGAGAAAGAATGATGGTAGTCCAGAGTTGTCCAAGGAAGAGTTGGGCCGCCTTGTTGCTTCTCGTTGGACAGGAGAAAATACTGAAGAACAGTCAAGAAACAAGGATAGTATGAACGATAGTGATGAAGAAAGTCATGATATCTCAAAAGAAGCCTATGAAAATGACGGTTATGCTTCAGAGACTGATGATGATAACCAAAGATACGATGATGACCAAGATGGTGATTTGGATGATGTTAGAGACGAATTTCATGATGATTCTACTTCATCTGAGAGATATTATTCAGATACAGAATTGGACTCAACAGATGTGGAAACCCAAAGTAACCCCTCCTGGCTTGAGAAGATACAAAAAACAGTTCGAAATGTCCTCAAAGCTGTTAATATCTTCCAGGCTCCAGTGAACCAATCAGATGCTGCTAACGTGCGCAAGGAATATGAGGAGTCCAGTGCCAAGTTATCGAAAATTCAGTCAAGGATCTCAAGTTTATCACAAAAGCTAAAGAATGATTTTGGTCCAGAGAAGGAGTTCTATTCATTCTATGATCAATGTTTTGAAATCAAGGAGAACAAATACGTTTACAAAATCTGTCCTTACAAACAAGCTTCACAGGTCGAGGGGCATTCAACAACTCGTTTGGGGCGCTGGGATAAATTTGAAGACTCGTATAGGGTTATGATTTTTTCAAGTGGGGATAAGTGCTGGAATGGACCTGATAGAAGCTTAAAGGTTAAGCTAAGATGTGGGGTTAAAAATGGCATAACCGATGTAGATGAACCAAGCCGTTGCGAGTACGTGGCATTGTTATCAACCCCAGCTGTTTGTGTAGAGGAAAAGCTTCAGGAACTAAAAAACAAGTTGGACATGCTGAGTAAAGAAGAGGCAGAGAAGCATGATGAACTTTGA 1935 40.57 MSQKGGFDSESLATLWVLCTALALALTPIVGSVSSPTHQFRGISPQDEMYYKSSDMIKCRDGSKKFSKAQLNDNFCDCPDGTDEPGTSACSNGKFYCRNAGHAPLLLFSSRVNDNICDCCDGSDEYDSEVKCPNTCWEAGKVARDKLKKKISTFEEGVKIRKQDVEHAKNAIIKDEAELLELKNEEKVLKGLVEQLKERKEQIEKVEEEERLLKEKEAKKHLEREKDETRKIESTETTDIGESKTHEEDNWKKNEATENYDKVYKQGEGSDDDKIGNWDDSASDQARMEEVDSELEAHLSNKPETEASLTKEVEEDTAVEKDPLAKSETGESAGTKESSEEVLRKNDGSPELSKEELGRLVASRWTGENTEEQSRNKDSMNDSDEESHDISKEAYENDGYASETDDDNQRYDDDQDGDLDDVRDEFHDDSTSSERYYSDTELDSTDVETQSNPSWLEKIQKTVRNVLKAVNIFQAPVNQSDAANVRKEYEESSAKLSKIQSRISSLSQKLKNDFGPEKEFYSFYDQCFEIKENKYVYKICPYKQASQVEGHSTTRLGRWDKFEDSYRVMIFSSGDKCWNGPDRSLKVKLRCGVKNGITDVDEPSRCEYVALLSTPAVCVEEKLQELKNKLDMLSKEEAEKHDEL 644
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 80087 97478 - MELO3C014731.2.1 Cme05g00010 327073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme05g00010 644 SUPERFAMILY Mannose 6-phosphate receptor domain 531 618 IPR009011 -
Cme05g00010 644 MobiDBLite consensus disorder prediction 220 452 - -
Cme05g00010 644 MobiDBLite consensus disorder prediction 220 358 - -
Cme05g00010 644 Gene3D - 520 619 IPR009011 -
Cme05g00010 644 ProSiteProfiles MRH domain profile. 525 620 IPR044865 -
Cme05g00010 644 MobiDBLite consensus disorder prediction 424 442 - -
Cme05g00010 644 Pfam Glucosidase II beta subunit-like 33 172 IPR028146 -
Cme05g00010 644 MobiDBLite consensus disorder prediction 370 406 - -
Cme05g00010 644 Pfam Glucosidase II beta subunit-like protein 486 644 IPR036607 -
Cme05g00010 644 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 28 644 IPR039794 -
Cme05g00010 644 Coils Coil 165 232 - -
Cme05g00010 644 Coils Coil 616 644 - -
Cme05g00010 644 MobiDBLite consensus disorder prediction 407 423 - -
Cme05g00010 644 Coils Coil 482 509 - -
Cme05g00010 644 PANTHER BNACNNG14010D PROTEIN 28 644 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g00457 Cme-Chr1:3311912 Cme05g00010 Cme-Chr5:80087 9.85E-06 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme05g00010 K08288 - csv:101221877 1160.98