Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme05g00031 ATGCCGACGAGTTTCAGGCCTGAGCTTCTCACCATCACCGTCGCTGTGGTTGCTGTCGGCGTTGCCACTGCCTACTATTTCTACGTCGCCAAGAAATCCAAATCCAAAGGTTGCTTGGACCCTGATAACTTCAAGGAATTTAAACTAGTTAAACGCACACAGCTTAGCCACAATGTAGCAAAGTTCAGATTCTCTCTTCCGACTCCAACCTCAATCTTGGGGCTGCCGATTGGGCAGCATATGAGCTGCAGACGATTGATTGATGTGTTGTTGTACAGAGGAAAAGATAGCCAAGGTGAAGATGTTGTGAAACCTTACACCCCAACCACTTTGGACACAGATGTTGGATACTTTGAGTTGGTCATTAAGATGTATCCACAAGGAAGGATGTCCCACCACTTTCGTGAGATGCGTGAAGGTGATTACTTGGCTGTGAAAGGTCCAAAGGGACGATTCAAGTATGAACCTAATGAAGTAGAGGCCTTTGGAATGCTTGCTGGAGGCACAGGCATAACTCCTATGTTCCAGGTTGCAAGAGCAATACTAGAAAATCCAGTGGATCGCACCAACGTGCATCTTATCTATGCTAATGTTACTTATGAAGACATTCTTCTGAAGGAAGAATTGGATAGTCTTGCAACTACGTTCCCTACCCGTTTTTCTATCTACTATGTCCTCAATCAGCCTCCAGAAGAATGGGATGGTGGTGTTGGCTTTGTAACTGAGGAAATGATACGGCTGCACTGTCCTGCGCCATCCCCTAATGTCCGGATTTTGAGGTGCGGACCACCACCCATGAACAAAGCTATGGCAGCTTACCTCAACACTATTGGCTACACTTCCCAAATGCAGTTTCAGTTCTAA 864 46.06 MPTSFRPELLTITVAVVAVGVATAYYFYVAKKSKSKGCLDPDNFKEFKLVKRTQLSHNVAKFRFSLPTPTSILGLPIGQHMSCRRLIDVLLYRGKDSQGEDVVKPYTPTTLDTDVGYFELVIKMYPQGRMSHHFREMREGDYLAVKGPKGRFKYEPNEVEAFGMLAGGTGITPMFQVARAILENPVDRTNVHLIYANVTYEDILLKEELDSLATTFPTRFSIYYVLNQPPEEWDGGVGFVTEEMIRLHCPAPSPNVRILRCGPPPMNKAMAAYLNTIGYTSQMQFQF 287
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 243873 247183 + MELO3C014713.2.1 Cme05g00031 327094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme05g00031 287 Pfam Oxidoreductase FAD-binding domain 47 154 IPR008333 -
Cme05g00031 287 Gene3D Translation factors 37 144 - -
Cme05g00031 287 PRINTS Cytochrome B5 reductase signature 201 212 - -
Cme05g00031 287 PRINTS Cytochrome B5 reductase signature 140 154 - -
Cme05g00031 287 PRINTS Cytochrome B5 reductase signature 163 182 - -
Cme05g00031 287 PRINTS Cytochrome B5 reductase signature 73 84 - -
Cme05g00031 287 PRINTS Cytochrome B5 reductase signature 257 265 - -
Cme05g00031 287 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 42 155 IPR017927 GO:0016491
Cme05g00031 287 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 163 182 IPR001709 GO:0016491
Cme05g00031 287 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 257 265 IPR001709 GO:0016491
Cme05g00031 287 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 201 212 IPR001709 GO:0016491
Cme05g00031 287 PANTHER NADH-CYTOCHROME B5 REDUCTASE 4 287 IPR001834 GO:0016491
Cme05g00031 287 Pfam Oxidoreductase NAD-binding domain 164 270 IPR001433 GO:0016491
Cme05g00031 287 SUPERFAMILY Riboflavin synthase domain-like 39 157 IPR017938 -
Cme05g00031 287 Gene3D - 145 287 IPR039261 -
Cme05g00031 287 PANTHER NADH-CYTOCHROME B5 REDUCTASE 4 287 - -
Cme05g00031 287 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 143 281 IPR039261 -
Cme05g00031 287 CDD cyt_b5_reduct_like 47 287 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme05g00031 Cme-Chr5:243873 Cme08g01481 Cme-Chr8:13612767 1.48E-145 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme05g00031 K00326 - csv:101219272 533.872