Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme05g00091 ATGGCGGCTTCTTTTAAAGCTATTATTTCTTTGGTACTGTGTTTGATGATGGCTGTGTCTGTGAGATCTCAGCTTAGCTCCACCTTCTACGACACTACATGTCCTAACGTATCAAGCATTGTGCGTGGTGTTATGCAGCAAGCTCTTCAAAGTGACGATAGAGCTGGTGCCAAAATCATCCGTCTCCATTTTCATGATTGTTTCGTCGACGGTTGTGATGGGTCGGTGCTACTCGAGGACCAAGATGGTATAACGAGTGAGTTGGGTGCACCGGGAAACGGAGGCATCACGGGTTTCAATATTGTTGATGACATCAAAACTGCAGTTGAGAATGTTTGTCCAGGAGTCGTTTCATGTGCTGACATTCTAGCCATTGCTTCGAGAGATGCAGTCACCTTGGCATCAGGACAGGGTTGGACGGTTCAATTGGGAAGAAGAGACAGTAGAACAGCAAATCTGCAAGGAGCCACGAATAGGCTCCCAAGTCCTTTTGAGAGTCTCTCCGAAATCCAAACCAAATTTACCGATGTTGGTCTTAACGGTGGTACCGATGTCGTTGCTCTATCAGGTGCACACACATTTGGACGTTCAAGATGCATGTTTTTCAGTGGACGCCTAAGCAATAATACAAACGCAGACTCACCCATAGACCCAACATACGCGAGTGAGTTGAGCCAAAGTTGTCAATCAGGGGGAAACACATTTGTGAATCTAGACCCAACGACGCCAAACACATTCGACAGAAACTACTTTACAAATCTTCAGAACAACCGAGGACTTTTGAGAAGTGACCAAGTTCTGTTTTCTACTGATGGAGCTTCAACTATCAGTATTGTCAACAGCTTTGCCAGCAGTGAGAGTGCATTTGCCGACGCCTTCGCTCAATCAATGATAAGGATGGGAGATCTCGACCCTAAGACTGGGACCACCGGAGAAATCAGGACCAATTGTAGAAGACTCAATTAA 966 45.86 MAASFKAIISLVLCLMMAVSVRSQLSSTFYDTTCPNVSSIVRGVMQQALQSDDRAGAKIIRLHFHDCFVDGCDGSVLLEDQDGITSELGAPGNGGITGFNIVDDIKTAVENVCPGVVSCADILAIASRDAVTLASGQGWTVQLGRRDSRTANLQGATNRLPSPFESLSEIQTKFTDVGLNGGTDVVALSGAHTFGRSRCMFFSGRLSNNTNADSPIDPTYASELSQSCQSGGNTFVNLDPTTPNTFDRNYFTNLQNNRGLLRSDQVLFSTDGASTISIVNSFASSESAFADAFAQSMIRMGDLDPKTGTTGEIRTNCRRLN 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 582040 584119 - MELO3C031049.2.1 Cme05g00091 327154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme05g00091 321 Gene3D - 29 321 - -
Cme05g00091 321 SUPERFAMILY Heme-dependent peroxidases 24 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cme05g00091 321 Gene3D Peroxidase, domain 2 161 300 - -
Cme05g00091 321 ProSiteProfiles Plant heme peroxidase family profile. 24 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme05g00091 321 CDD secretory_peroxidase 24 319 IPR033905 GO:0004601|GO:0042744
Cme05g00091 321 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme05g00091 321 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme05g00091 321 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme05g00091 321 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme05g00091 321 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme05g00091 321 PANTHER PEROXIDASE 58 13 321 - -
Cme05g00091 321 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Cme05g00091 321 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00091 321 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00091 321 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00091 321 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00091 321 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00091 321 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00091 321 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00091 321 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00091 321 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00091 321 Pfam Peroxidase 41 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme05g00091 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Cme05g00091 321 PANTHER PEROXIDASE 72-RELATED 13 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme05g00091 Cme-Chr5:582040 Cme05g00098 Cme-Chr5:621341 4.23E-135 dispersed
Cme05g00091 Cme-Chr5:582040 Cme05g00092 Cme-Chr5:590473 7.93E-147 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme05g00091 K00430 - csv:101212957 566.229