Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme05g00092 ATGGCTTCCTTGTTCAAAGTTGCTTTCTTTTTGTTTCTGGGATTGATGGTTAGAGCTTCCCAAGCTCAGCTCTGCCCCACGTTTTACGATGAATCATGCCCCGACGTATCCAACATTGTGCGGGGTGTGGTAAAACAAGCCTTGGCCTTTGACGAACGTGCTGGTGCCAGACTCATTCGACTTCATTTCCACGACTGCTTTGTAAATGGGTGTGATGGGTCGGTTTTACTAGAGGACCAACCTGGTGTAGTGAGTGAGCTTGGCGCCCCTGGAAACGCCAATATTACAGGGTTTAACATTGTTAATAACATCAAAGCTGCAGTTGAAAAGGCTTGTCCCGGTGTTGTTTCATGTGCTGACATCTTAGCCATAGCTTCCGTGGAAGCAGTTAATTTGGCAGGAGGACCGTGTTGGGAGGTACAACTAGGAAGAAGAGACAGTAGAAGGGCAAATTTACAAGGCGCAATAGATGGGCTTCCAAGTCCTTTCGAAGATGTTACACAACTTAAACGCAAGTTCGGTAGAGTAGGTCTTGATTCTACTGATCTTGTTGCCTTATCTGGTGCACACACATTTGGGAAATCGAGATGTCGATTTTTCGACCGACGTTTGAACGTTTCAAATCCAGATAACACACTGGACGCGAGGTTTGCACAACAGCTCCGTCGAGCTTGCAGTAGCAGCCGGGACACGTTTGTGAATCTGGATCCCACCACTCCCAACCAGTTCGACAAGAACTACTACACAAACCTTCAGTCCAACATCGGCCTTCTCGGCAGTGACCAAGTCCTTCACTCCACTCCCGGCGAGGACACCGTCGACATCGTCAACGTCTTCGCCGTCAGCCAGCAACAGTTCTTCGACAGCTTCGGCCAGTCCATGATCAACATGGGAAATATCCGACCGTTAACCGGTAACCAAGGAGAAATTAGATCCAATTGCCGAAGGCTGAACTAA 957 48.48 MASLFKVAFFLFLGLMVRASQAQLCPTFYDESCPDVSNIVRGVVKQALAFDERAGARLIRLHFHDCFVNGCDGSVLLEDQPGVVSELGAPGNANITGFNIVNNIKAAVEKACPGVVSCADILAIASVEAVNLAGGPCWEVQLGRRDSRRANLQGAIDGLPSPFEDVTQLKRKFGRVGLDSTDLVALSGAHTFGKSRCRFFDRRLNVSNPDNTLDARFAQQLRRACSSSRDTFVNLDPTTPNQFDKNYYTNLQSNIGLLGSDQVLHSTPGEDTVDIVNVFAVSQQQFFDSFGQSMINMGNIRPLTGNQGEIRSNCRRLN 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 590473 593021 - MELO3C014658.2.1 Cme05g00092 327155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme05g00092 318 ProSiteProfiles Plant heme peroxidase family profile. 23 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme05g00092 318 Gene3D - 28 318 - -
Cme05g00092 318 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Cme05g00092 318 SUPERFAMILY Heme-dependent peroxidases 23 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cme05g00092 318 Gene3D Peroxidase, domain 2 160 297 - -
Cme05g00092 318 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme05g00092 318 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme05g00092 318 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme05g00092 318 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme05g00092 318 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme05g00092 318 PANTHER PEROXIDASE 72-RELATED 11 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00092 318 Pfam Peroxidase 41 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme05g00092 318 PANTHER PEROXIDASE 58 11 318 - -
Cme05g00092 318 CDD secretory_peroxidase 23 316 IPR033905 GO:0004601|GO:0042744
Cme05g00092 318 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Cme05g00092 318 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00092 318 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00092 318 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00092 318 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00092 318 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00092 318 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00092 318 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00092 318 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00092 318 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme05g00092 Cme-Chr5:590473 Cme05g00098 Cme-Chr5:621341 8.19E-144 dispersed
Cme05g00091 Cme-Chr5:582040 Cme05g00092 Cme-Chr5:590473 7.93E-147 tandem
Cme05g00092 Cme-Chr5:590473 Cme05g00093 Cme-Chr5:599181 2.37E-138 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme05g00092 K00430 - csv:101212717 587.415