Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme05g00093 | ATGGCCTCCGCCTCCCCCAACGCTGCCGTTGCCTCCTTTTTCTTTCTAGCTCTTCTCTTCCGCGCCTCTTTCGCTCAACTCTCCGAGACCTATTACGATCAAACCTGCCCTCGCCTCCCCAACATTGTCCGTGCCTCCGTCAAGAAAGCCATCCAATCCGACATACGTGCCGGTGCTAAACTCATTCGCCTCCATTTCCATGATTGCTTCGTCAATGGATGCGATGGCTCTGTTTTGCTTGAGGATGCTCCCGGCATAGTCAGTGAGCTTAACTCACCTGGAAATCAAGGAATCCAAGGACTTGAAATTGTCGACGCCATTAAAGCGGATGTTGAAAAAGAATGCCCCGGCATCGTCTCCTGTGCCGACATCCTAGCTCAAGCTTCCAAGGACTCTGTCGATGTGCAAGGAGGGCCGAGCTGGAGAGTTTTATACGGAAGAAGAGATAGCAGAATCGCCAACAAAACAGGGGCGGATAGTGGGTTAGCCAGTCCCTTCGAAACTCTAGATGAACTCAAAGCCAAATTTGCGGCTGTTGGGCTCGATACCACTGATCTCGTCGCTTTATCTGGGGCGCATACATTTGGACGATCGAGATGCGTATTCTTCAGCCACCGATTTGCGAACTTCAACGGAACTGGAAGCCCAGACCCATCACTGGACGCAAACTACAGGCGATTTCTTGAAGGGGTTTGTGCAGCAGGAGCAAACACAAGAGCCAATTTCGACCCGGTAACACCGGATGTGTTCGACAAAAATTACTACACAAATCTTCAAGTGGGGAAGGGGCTTTTGCAGAGCGATCAAGAGCTGTTCTCTACTCCTGGGGCTGACACCATCGCCATTGTCAACAGCTTCGCGGCCAGAGAAGGAACATTCTTCAAGGAGTTCCGGAAGTCAATGATCAATATGGGAAATATTAAACCTTTGACTGGATGGCGTGGGGAAATTAGAAGAAACTGTAGAAGGGTTAATTCCAACTCCGGATTGTTCGGTGGAGAAGGAGAAGGAGAAGGAGAAGGCCATGGTGTCATGTAA | 1038 | 50.19 | MASASPNAAVASFFFLALLFRASFAQLSETYYDQTCPRLPNIVRASVKKAIQSDIRAGAKLIRLHFHDCFVNGCDGSVLLEDAPGIVSELNSPGNQGIQGLEIVDAIKADVEKECPGIVSCADILAQASKDSVDVQGGPSWRVLYGRRDSRIANKTGADSGLASPFETLDELKAKFAAVGLDTTDLVALSGAHTFGRSRCVFFSHRFANFNGTGSPDPSLDANYRRFLEGVCAAGANTRANFDPVTPDVFDKNYYTNLQVGKGLLQSDQELFSTPGADTIAIVNSFAAREGTFFKEFRKSMINMGNIKPLTGWRGEIRRNCRRVNSNSGLFGGEGEGEGEGHGVM | 345 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 599181 | 600746 | - | MELO3C014657.2.1 | Cme05g00093 | 327156 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme05g00093 | 345 | Pfam | Peroxidase | 43 | 288 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme05g00093 | 345 | CDD | secretory_peroxidase | 26 | 324 | IPR033905 | GO:0004601|GO:0042744 | |
Cme05g00093 | 345 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 185 | 195 | IPR019793 | - | |
Cme05g00093 | 345 | Gene3D | Peroxidase, domain 2 | 163 | 304 | - | - | |
Cme05g00093 | 345 | ProSitePatterns | Peroxidases active site signature. | 58 | 69 | IPR019794 | GO:0004601 | |
Cme05g00093 | 345 | PANTHER | PEROXIDASE 58 | 15 | 325 | - | - | |
Cme05g00093 | 345 | ProSiteProfiles | Plant heme peroxidase family profile. | 26 | 325 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme05g00093 | 345 | PANTHER | PEROXIDASE 72-RELATED | 15 | 325 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme05g00093 | 345 | PRINTS | Haem peroxidase superfamily signature | 58 | 72 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme05g00093 | 345 | PRINTS | Haem peroxidase superfamily signature | 119 | 136 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme05g00093 | 345 | PRINTS | Haem peroxidase superfamily signature | 137 | 149 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme05g00093 | 345 | PRINTS | Haem peroxidase superfamily signature | 185 | 200 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme05g00093 | 345 | PRINTS | Haem peroxidase superfamily signature | 243 | 258 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme05g00093 | 345 | PRINTS | Plant peroxidase signature | 36 | 55 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme05g00093 | 345 | PRINTS | Plant peroxidase signature | 60 | 80 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme05g00093 | 345 | PRINTS | Plant peroxidase signature | 99 | 112 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme05g00093 | 345 | PRINTS | Plant peroxidase signature | 118 | 128 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme05g00093 | 345 | PRINTS | Plant peroxidase signature | 137 | 152 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme05g00093 | 345 | PRINTS | Plant peroxidase signature | 184 | 196 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme05g00093 | 345 | PRINTS | Plant peroxidase signature | 241 | 256 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme05g00093 | 345 | PRINTS | Plant peroxidase signature | 257 | 274 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme05g00093 | 345 | PRINTS | Plant peroxidase signature | 299 | 312 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme05g00093 | 345 | Gene3D | - | 31 | 325 | - | - | |
Cme05g00093 | 345 | SUPERFAMILY | Heme-dependent peroxidases | 26 | 325 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme05g00093 | Cme-Chr5:599181 | Cme05g00095 | Cme-Chr5:608631 | 1.59E-172 | dispersed | |
Cme05g00092 | Cme-Chr5:590473 | Cme05g00093 | Cme-Chr5:599181 | 2.37E-138 | tandem | |
Cme05g00093 | Cme-Chr5:599181 | Cme05g00094 | Cme-Chr5:601610 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme05g00093 | K00430 | - | csv:101217781 | 620.928 |