Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme05g00094 ATGGCCTCCGCCTCCTCCGCCAACGCTGCCATTACCTCCTTTTTCTTTCTAGCTCTTCTCATCGGCGGCTCTTCCGCTCAACTCTCCGAAACCTTTTACGATCAAACCTGCCCTCGCTTGGCCAACGTTGTCCGCGCCTCCGTCAAGAAAGCCATCGAAAGCGACATCCGAGCCGGTGCTAAACTTATTCGCCTCCATTTTCACGATTGCTTCGTCAATGGATGCGATGGCTCTGTTTTGTTAGAGGATGCTCCCGGCATAGTCAGTGAGCTCAACTCACCTGGAAATCAAGGAATCCAAGGGCTTGAAATTGTCGACGCCATTAAAGCCGATGTCGAAAAAGAATGCCCTGGCATCGTCTCATGTGCCGACATCTTAGCTCAGGCTTCTAAAGACTCTGTCGATGTGCAAGGAGGGCCAAGCTGGAGAGTGTTATACGGAAGACGAGACAGCAGAATAGCGAACAAAACAGGGGCGGACAGTAACTTGGCAAGTCCCTTCGAAACTCTAGACCAACTCAAAGCTAAATTTAAGAATGTTGGGCTCAATACCGTCGATCTCGTCGCTTTATCAGGGGCGCATACATTTGGACGATCGAGATGCAGATTCTTCAGCCACCGATTTGCGAATTTCAACAATACAGGAAGCCCAGACCCATCATTGAACCCAGACTACAGGAGATTTCTTGAAGGGGTTTGTTCAGCAGGAGCAGACACAAGAGCGAATTTCGATCCAGTAACACCGGATATATTTGACAAAAATTACTACACAAATCTTCAAGTGGGGAAGGGGCTTTTGCAGAGCGATCAAGAGCTGTTCTCAACACCTGGAGCTGACACCATCCCCATTGTTAACAGCTTTGCAGCCAGAGAAGGAACATTCTTCAAGGAGTTCAGACAGTCGATGATCAATATGGGAAATATACAGCCTTTGACTGGTGGACAAGGGGAAATTAGACGAAACTGCAGGAGGGTTAATTCAAACTCTGGCTTGTTCTTCGGTGGAGAAGGAGAAGGAGAAGGCCGCGATGTTATGTAA 1038 48.46 MASASSANAAITSFFFLALLIGGSSAQLSETFYDQTCPRLANVVRASVKKAIESDIRAGAKLIRLHFHDCFVNGCDGSVLLEDAPGIVSELNSPGNQGIQGLEIVDAIKADVEKECPGIVSCADILAQASKDSVDVQGGPSWRVLYGRRDSRIANKTGADSNLASPFETLDQLKAKFKNVGLNTVDLVALSGAHTFGRSRCRFFSHRFANFNNTGSPDPSLNPDYRRFLEGVCSAGADTRANFDPVTPDIFDKNYYTNLQVGKGLLQSDQELFSTPGADTIPIVNSFAAREGTFFKEFRQSMINMGNIQPLTGGQGEIRRNCRRVNSNSGLFFGGEGEGEGRDVM 345
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 601610 603349 - MELO3C014656.2.1 Cme05g00094 327157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme05g00094 345 Gene3D - 32 326 - -
Cme05g00094 345 SUPERFAMILY Heme-dependent peroxidases 27 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cme05g00094 345 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Cme05g00094 345 Pfam Peroxidase 44 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme05g00094 345 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00094 345 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00094 345 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00094 345 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00094 345 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00094 345 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00094 345 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00094 345 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00094 345 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00094 345 PANTHER PEROXIDASE 58 16 326 - -
Cme05g00094 345 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Cme05g00094 345 Gene3D Peroxidase, domain 2 164 305 - -
Cme05g00094 345 ProSiteProfiles Plant heme peroxidase family profile. 27 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme05g00094 345 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme05g00094 345 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme05g00094 345 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme05g00094 345 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme05g00094 345 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme05g00094 345 PANTHER PEROXIDASE 72-RELATED 16 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00094 345 CDD secretory_peroxidase 27 325 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme05g00094 Cme-Chr5:601610 Cme05g00098 Cme-Chr5:621341 7.02E-162 dispersed
Cme05g00093 Cme-Chr5:599181 Cme05g00094 Cme-Chr5:601610 0 tandem
Cme05g00094 Cme-Chr5:601610 Cme05g00095 Cme-Chr5:608631 1.23E-170 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme05g00094 K00430 - csv:101217543 631.713