Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme05g00095 ATGGGATCTTTCACTTTCTTCCTTTTCTTTGTGTGTATTTTGTTTGTAACCTCTTACGCCCAACTCACTGAGAATTTCTACGAACAAACTTGCCCTCGTTTACCTAACATTGTCCGTCGTGAAGTCAAAAGAGCTATCGAAACTGACATCCGCGCCGGTGCTAAACTCATTCGCTTCCATTTCCACGATTGTTTCGTCCAAGGGTGCGATGGGTCTGTTTTGCTAGAGGATCCTCCTGGCTTCGAGTCCGAGCTCAACGGACTTGGAAATTTAGGAATCCAAGGACTCGAGATTGTCGACGCTATCAAAGCAGCCGTCGAGAGAGAATGCCCTGGCGTTGTCTCCTGTGCCGACATCCTAGCTCAAGCCTCTAAAGACTCCGTCGACGTGCAAGGAGGACCCAGTTGGAGAGTTTTATACGGAAGAAGAGATAGCAGAACAGCCAATAAAACAGGGGCTGATGAACTCCCAAGCCCCTTCGAAGATCTTCCCCCTCTCCAAAAGAAATTCCGAGATGTTGGGTTGAATTCAACCGATCTTGTGGCTCTATCAGGGGCACATACGTTCGGGCGGTCCAGATGCTTGTTCTTCAGTGGTCGTTTCTCCAACTTCAGTGGCAGTGGGCAGCCAGATCCGACGCTGGATCCAACGTACAGGCAAGAACTTGAAAGAGCTTGTACAGGCCCAGAAACACGAGTAAATTTCGATCCAACAACACCGGATACATTTGATAAAAATTACTATACCAATCTTCTAGCCAATAAAGGGCTGTTACAGAGCGACCAAGTTCTGTTTTCAACACAAGGGGCTGAAACAGTTGAAATTGTTAGACGTATGGCGTCGAGACAAGAAACTTTCTTTAGACAATTTCGGTTGTCGATGATTAAGATGGGGAACATTAAACCATTAACTGGAAACCAAGGGGAAATTAGAAGAAGCTGCAGGAGGGTTAATGACTTGGGAGGTGAAACAGGGCATGATGTTATGTAA 990 46.46 MGSFTFFLFFVCILFVTSYAQLTENFYEQTCPRLPNIVRREVKRAIETDIRAGAKLIRFHFHDCFVQGCDGSVLLEDPPGFESELNGLGNLGIQGLEIVDAIKAAVERECPGVVSCADILAQASKDSVDVQGGPSWRVLYGRRDSRTANKTGADELPSPFEDLPPLQKKFRDVGLNSTDLVALSGAHTFGRSRCLFFSGRFSNFSGSGQPDPTLDPTYRQELERACTGPETRVNFDPTTPDTFDKNYYTNLLANKGLLQSDQVLFSTQGAETVEIVRRMASRQETFFRQFRLSMIKMGNIKPLTGNQGEIRRSCRRVNDLGGETGHDVM 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 608631 610613 - MELO3C014655.2.1 Cme05g00095 327158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme05g00095 329 Gene3D - 26 318 - -
Cme05g00095 329 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00095 329 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00095 329 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00095 329 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00095 329 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00095 329 PRINTS Plant peroxidase signature 178 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00095 329 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00095 329 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00095 329 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00095 329 PANTHER PEROXIDASE 58 9 318 - -
Cme05g00095 329 Gene3D Peroxidase, domain 2 157 297 - -
Cme05g00095 329 PANTHER PEROXIDASE 72-RELATED 9 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00095 329 CDD secretory_peroxidase 21 317 IPR033905 GO:0004601|GO:0042744
Cme05g00095 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 179 189 IPR019793 -
Cme05g00095 329 ProSiteProfiles Plant heme peroxidase family profile. 21 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme05g00095 329 SUPERFAMILY Heme-dependent peroxidases 21 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cme05g00095 329 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme05g00095 329 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme05g00095 329 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme05g00095 329 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme05g00095 329 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme05g00095 329 Pfam Peroxidase 38 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme05g00093 Cme-Chr5:599181 Cme05g00095 Cme-Chr5:608631 1.59E-172 dispersed
Cme05g00095 Cme-Chr5:608631 Cme05g00098 Cme-Chr5:621341 1.59E-150 dispersed
Cme05g00097 Cme-Chr5:616943 Cme05g00095 Cme-Chr5:608631 1.11E-115 dispersed
Cme05g00094 Cme-Chr5:601610 Cme05g00095 Cme-Chr5:608631 1.23E-170 tandem
Cme05g00095 Cme-Chr5:608631 Cme05g00096 Cme-Chr5:613597 1.46E-130 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme05g00095 K00430 - csv:101212230 514.998