Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme05g00097 | ATGACTGCTTTGCCAATGCACGGGTGTGATGGATCTGTGCTACTGGAAGACGTACCTGGTGTTATCGACAGTGAGTTGAACGCACCTCCCAACAATGGAATCCAAGGGCTAGACATTGTGGATAACATCAAAGCAGCAGTTGAAAGCTCTTGTCCAGGCATTGTTTCTTGTGCTGACATATTAGCTCTCTCATCTCAAGTGGCTGTTGTACTGTCTGGAGGGCCGGCATGGATTGTCCCATTGGGAAGAAAAGACAGCAGAATAGCAAACAGAGCTGCAGCAGCAAATCTGCCAAGTCCCTTCGAAACTCTAGACGTGCTGAAATCCAAATTTGCAGCATTCGGGTTGAGTTCTACGGATCTTGTGACTCTATCGGGAGCGCACACGTTCGGTCGATCAAGATGTCTCTTCTTCACAGGACGGTTCGACAATTTCAACAACACCGGCCTACCGGACCCGACTTTGGATGCTGCATACAGGGAGCAGCTACGCCAACTTTGTGCCACTCCAGTAACAAGAGTAAACTTCGATCCAACCACACCAGACACATTCGATAAAAACTATTACGTTAATCTCCAAAACCATAAAGGGCTTCTCCAAAGTGATCAAGAGCTTTTCTCAACCCCTGGGGCTGATACAACTGCCATTGTCAACAGATTTGCTGCTAGCCAACTTCTGTTCTTTATTCAATTTGGTAATTCGATGATCAAAATGGGGAATCTTAGCCCTCCACCTGGCACCCCATCTGAAGTCAGATTGAACTGTAGGAGGATCAACCCATCCACGACCACCCTCCATGATGTTATCTAA | 810 | 47.16 | MTALPMHGCDGSVLLEDVPGVIDSELNAPPNNGIQGLDIVDNIKAAVESSCPGIVSCADILALSSQVAVVLSGGPAWIVPLGRKDSRIANRAAAANLPSPFETLDVLKSKFAAFGLSSTDLVTLSGAHTFGRSRCLFFTGRFDNFNNTGLPDPTLDAAYREQLRQLCATPVTRVNFDPTTPDTFDKNYYVNLQNHKGLLQSDQELFSTPGADTTAIVNRFAASQLLFFIQFGNSMIKMGNLSPPPGTPSEVRLNCRRINPSTTTLHDVI | 269 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 616943 | 618444 | - | MELO3C014653.2.1 | Cme05g00097 | 327160 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme05g00097 | 269 | Gene3D | - | 7 | 259 | - | - | |
Cme05g00097 | 269 | PANTHER | PEROXIDASE 58 | 7 | 259 | - | - | |
Cme05g00097 | 269 | PRINTS | Plant peroxidase signature | 119 | 131 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme05g00097 | 269 | PRINTS | Plant peroxidase signature | 175 | 190 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme05g00097 | 269 | PRINTS | Plant peroxidase signature | 191 | 208 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme05g00097 | 269 | PRINTS | Plant peroxidase signature | 73 | 88 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme05g00097 | 269 | PRINTS | Plant peroxidase signature | 35 | 48 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme05g00097 | 269 | PRINTS | Plant peroxidase signature | 233 | 246 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme05g00097 | 269 | PRINTS | Plant peroxidase signature | 54 | 64 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme05g00097 | 269 | SUPERFAMILY | Heme-dependent peroxidases | 7 | 260 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cme05g00097 | 269 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 120 | 130 | IPR019793 | - | |
Cme05g00097 | 269 | Gene3D | Peroxidase, domain 2 | 98 | 238 | - | - | |
Cme05g00097 | 269 | ProSiteProfiles | Plant heme peroxidase family profile. | 6 | 259 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme05g00097 | 269 | CDD | secretory_peroxidase | 7 | 258 | IPR033905 | GO:0004601|GO:0042744 | |
Cme05g00097 | 269 | PRINTS | Haem peroxidase superfamily signature | 177 | 192 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme05g00097 | 269 | PRINTS | Haem peroxidase superfamily signature | 120 | 135 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme05g00097 | 269 | PRINTS | Haem peroxidase superfamily signature | 55 | 72 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme05g00097 | 269 | PRINTS | Haem peroxidase superfamily signature | 73 | 85 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme05g00097 | 269 | PANTHER | PEROXIDASE 72-RELATED | 7 | 259 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme05g00097 | 269 | Pfam | Peroxidase | 7 | 223 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme05g00097 | Cme-Chr5:616943 | Cme05g00095 | Cme-Chr5:608631 | 1.11E-115 | dispersed | |
Cme05g00096 | Cme-Chr5:613597 | Cme05g00097 | Cme-Chr5:616943 | 2.16E-127 | tandem | |
Cme05g00097 | Cme-Chr5:616943 | Cme05g00098 | Cme-Chr5:621341 | 4.43E-124 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme05g00097 | K00430 | - | csv:101211752 | 499.204 |