Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme05g00099 ATGTCGTTCCCTAAAGTTGCAGCTTTAGCAGCCTTGTTGTGTATGATGTTGAGGGGCTCTTTTGCCCAACTCAGTCCTACTTTCTACGACCAATCTTGTCCTAATCTTACCGCCGTCGTCCGAGATACTGTTAGCCAGGCATTGCAGGGTGATGTTCGAGCCGGAGCCAAGCTTATTCGCTTTCATTTCCACGATTGTTTTGTCAACGGTTGTGATGGGTCAGTTTTGCTAGAAAATCAAGATGGTGTAGAGAGTGAATTAGATGCTCCAGGAAACGAAGGAATACAAGGCTTTGACATTGTTGATAGCATCAAAACTGCAGTCGAAGCTTCTTGTCCAAACACTGTGTCTTGTGCAGATATCTTAGCCATTTCAGCCCGTGAATCTGTTGTCTTGACAGGAGGGCCAAGTTGGGTAGTCCAATTAGGAAGACGAGATAGCCAAAATGCAAATAGAACTGGAGCTGAAAACAACCTCCCAAGCCCTTTTGAAACACTCGATCAACTTCGAGCAAAATTTAATGCAGCTGGGCTCGATTCTATTGATCTTGTCACTTTATCTGGAGCGCATACATTTGGAAGGTCAAGATGCGTATTCTTCAGTGGGAGGCTAAACAATTTCAATGGCACCGGAAGTCCAGACTCGACTCTTGACCCTACATTTAGGGATGCATTGGTCATCGCTTGTCCGACCGGCGACGGAAACAACCGCATCGCACTCGACGTGGCGACACCGGACGCCTTCGACAATGCATATTACGCTGATTTGGTTACAAACCGTGGGCTTCTCCAATCGGATCAAGAGCTGTTCTCAACCGAAGGGGCAGAAACCATCGAGATCGTCAACCGTTTTGCCGGCAACCAATCTGATTTCTTCGCTCAGTTTGGTCAGTCAATGATAAATATGGGGAACCTTCAACCGTTACTGGCACCAGCGGGAGAAATCAGGACCAATTGTCGACGTGTTAATCCTACGACTACTACAACTGCTGGTACTGCTGTTATGTAA 1008 46.83 MSFPKVAALAALLCMMLRGSFAQLSPTFYDQSCPNLTAVVRDTVSQALQGDVRAGAKLIRFHFHDCFVNGCDGSVLLENQDGVESELDAPGNEGIQGFDIVDSIKTAVEASCPNTVSCADILAISARESVVLTGGPSWVVQLGRRDSQNANRTGAENNLPSPFETLDQLRAKFNAAGLDSIDLVTLSGAHTFGRSRCVFFSGRLNNFNGTGSPDSTLDPTFRDALVIACPTGDGNNRIALDVATPDAFDNAYYADLVTNRGLLQSDQELFSTEGAETIEIVNRFAGNQSDFFAQFGQSMINMGNLQPLLAPAGEIRTNCRRVNPTTTTTAGTAVM 335
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 628079 629664 - MELO3C014651.2.1 Cme05g00099 327162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme05g00099 335 Pfam Peroxidase 40 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme05g00099 335 CDD secretory_peroxidase 23 322 IPR033905 GO:0004601|GO:0042744
Cme05g00099 335 SUPERFAMILY Heme-dependent peroxidases 23 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cme05g00099 335 PANTHER PEROXIDASE 72-RELATED 13 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00099 335 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme05g00099 335 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme05g00099 335 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme05g00099 335 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme05g00099 335 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme05g00099 335 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00099 335 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00099 335 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00099 335 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00099 335 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00099 335 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00099 335 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00099 335 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00099 335 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme05g00099 335 Gene3D Peroxidase, domain 2 160 302 - -
Cme05g00099 335 Gene3D - 28 323 - -
Cme05g00099 335 PANTHER PEROXIDASE 58 13 323 - -
Cme05g00099 335 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Cme05g00099 335 ProSiteProfiles Plant heme peroxidase family profile. 23 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme05g00099 Cme-Chr5:628079 Cme09g01539 Cme-Chr9:20471391 3.92E-139 dispersed
Cme05g00098 Cme-Chr5:621341 Cme05g00099 Cme-Chr5:628079 8.77E-146 tandem
Cme05g00099 Cme-Chr5:628079 Cme05g00100 Cme-Chr5:631104 4.13E-106 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme05g00099 K00430 - csv:101217743 635.95