Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme05g00154 ATGGAGAATTTGGAGGTGAAGTTAGAGGAAACAAGAGAATATTACAATAGTGGAAAAACAAAGGAAGCATCTTGGAGATTTTCACAACTTAAAGGTTTACACAAATTTCTTAACCAAAATCAACAACAAATTTACAATGCCCTTTTCCAAGATTTGGGGAAACACCATGTTGAAGCTTTTAGAGATGAGATCGGTAATCTACAAATGTCCCTCAATTTTGCTTTGGAGAATTTGAAACATTGGATGTCCCCCAAAAAGGCGAAGTTGCCGGCGATTGCTGTGTTGAATTCAGCAGAAGTGGTTCCCGAGCCTTTGGGGGTTGTTCTTGTGATCTCATCTTGGAACTTTCCGTTTGGGTTGTCGTTGGAGCCATTGATAGGGGCAATAGCAGCTGGAAATTGTGTGTTTTTGAAGACGTCGGAGTTTTCTCCGGCGAGTTCAGCTTTTCTGGCGAAAGTGATCGGAGATTATGTTGATAAGAAAGCAGTGAGAGTGGTTGAAGGAGGGGCAGCGACCGGAGAGCGGCTGCTGCAGCTGCGGTGGGAGAAGATTTTCTTTACAGGAAGTGAAAGAGTGGGGCGGATTGTTATGGCGGCCGCCGTGAAACACCTAACGCCGGTGACTTTGGAGCTCGGAGGGAAATGCCCCGCCATTGTCGACTCACTTTCATGTTCATGGGATATTGAGTCTACTGCTCAACGGATCGTTGTCGGAAAATTTGGAGCCTGCGCCGGTCAAGCTTGCATAGCAATTGATTATATCCTTGTTGAACACAAATTTATATCCACCTTGGTCGAATTGCTGAAGAAGTACATCAAGAAATTCTTCGATAAAGGTTCGAACGAAGCGAAAAACATGGCGAGAATCGTAAACAAACAAAACTTTTTGAGATTGAAGAATATGGTGGATGAACCTGCTGTCCAAGCTACAATCATTTATGGAGGATCCATGGACGAGGACAAATTGTTCGTTGAGCCGACTATTCTGTTGAACCCACCAAACGATGCAGAAATTATGAGAGAAGAAATCTTTGGACCAATCCTTCCCATAATTGGAATGGATAAGATTGAAGACAGTATAGATTTCATCAATTCAAGGGCTAAGCCTCTTGCCATTTATGCCTTCACAAAAGACAAAGCTTTCCAAAGAAGACTCGTCTCAGAAACTACGTCCGGCAGCTTGACATTTAATGATGCAATTATTCAGTATGCAGTGGATACACTCCCGTTTGGAGGGGTTGGTGAAAGTGGGATTGGCAGATACCATGGAAAATTCTCATTCGACACCTTTAGTCATGAAAAGGCAGTTGTGAAAAGGAGCTTCTTGATCGACTTCTGGTTCAGATATCCGCCCTGGAACAATCACAAGCTTGAGCTGCTTAGACATGCTTATAATTTTAACTATTTTCAGTTAGTTCTCACTGTTTTGGGTCTGAAGAGGTCTTAA 1446 42.95 MENLEVKLEETREYYNSGKTKEASWRFSQLKGLHKFLNQNQQQIYNALFQDLGKHHVEAFRDEIGNLQMSLNFALENLKHWMSPKKAKLPAIAVLNSAEVVPEPLGVVLVISSWNFPFGLSLEPLIGAIAAGNCVFLKTSEFSPASSAFLAKVIGDYVDKKAVRVVEGGAATGERLLQLRWEKIFFTGSERVGRIVMAAAVKHLTPVTLELGGKCPAIVDSLSCSWDIESTAQRIVVGKFGACAGQACIAIDYILVEHKFISTLVELLKKYIKKFFDKGSNEAKNMARIVNKQNFLRLKNMVDEPAVQATIIYGGSMDEDKLFVEPTILLNPPNDAEIMREEIFGPILPIIGMDKIEDSIDFINSRAKPLAIYAFTKDKAFQRRLVSETTSGSLTFNDAIIQYAVDTLPFGGVGESGIGRYHGKFSFDTFSHEKAVVKRSFLIDFWFRYPPWNNHKLELLRHAYNFNYFQLVLTVLGLKRS 481
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1044399 1050057 - MELO3C014601.2.1 Cme05g00154 327217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme05g00154 481 Pfam Aldehyde dehydrogenase family 14 436 IPR015590 GO:0016491
Cme05g00154 481 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 213 416 IPR016163 GO:0016620
Cme05g00154 481 PIRSF ALDH 1 476 IPR012394 GO:0006081
Cme05g00154 481 SUPERFAMILY ALDH-like 8 454 IPR016161 GO:0016491
Cme05g00154 481 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 12 434 IPR016162 GO:0016491
Cme05g00154 481 PANTHER ALDEHYDE DEHYDROGENASE 7 481 - -
Cme05g00154 481 PANTHER ALDEHYDE DEHYDROGENASE 7 481 IPR012394 GO:0006081
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme05g00154 Cme-Chr5:1044399 Cme07g01699 Cme-Chr7:22544320 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme05g00154 K00128 - csv:101205263 927.546