Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme05g00158 ATGGCGTCTCTGGCGCTTACTTCCTCGTATCTCCCTTCTCTCCGGTCGCGTCTTCCGAATTCTGAATCTAATGCTCGAATTCGTTGCTCATCTCTCCGTCCCAGTATTCCCAAATCCGCCATTTTCGGTAGCGGTGTTAGAACTAGGTTCCGCATTCCGTCTGCTCTATCCAATGAAGCTAAATTCGTTAAACCAGCTCTAAATTTCGGAAGTTCTGGTCCCAATCTCGGTGGTTTTACTGTCCGGGCGTCTTCTTCTTCTTCCTCTGCTGCTGCTGCTGCAGTTCCGGCTCCAGCTCCTCAGCCATGGCAAGGTGCGGCGATTAAGCCACTGATTGCATCGATTGCTACGGGTATCATTCTATGGTTTGTTCCGGTGCCGTCTGGTGTTTCTCGAAACGCGTGGCAATTGCTTGCGATTTTCCTCGCTACTATCGTTGGGATTATTACTCAGCCCTTGCCTCTTGGTGCTGTTGCCTTGCTGGGACTTGGTGCCTCTGTTCTGACTAAAACCCTAACTTTCTCTGCTGCATTCTCTGCGTTTGGCGATCCCATTCCATGGCTCATAGCTCTTGCCTTCTTCTTTGCTCGAGGGTTCATTAAGACCGGACTTGGTAATCGAATTGCTTATCAATTTGTTTCTCTATTCGGTAGTTCGTCCTTAGGGTTAGGGTATAGTTTAGTATTTAGCGAGGCCTTATTGGCGCCGGCAATTCCTTCGGTATCAGCTAGAGCAGGAGGGATATTCCTTCCACTGGTAAAATCCCTCTGTGTTGCTTGTGGTAGCAATGTTGGAGATGGGACGGAGAATAGGTTGGGAGCTTGGTTGATGCTCACTTGCTTTCAAACTTCGGTGATTTCATCATCTATGTTCTTGACAGCCATGGCTGCTAATCCCCTGAGTGCGACTCTAACGTATAACACAATTAAACAGACAATTGGATGGACTGACTGGGCTAAAGCAGCCATTGTTCCAGGATTGATCTCCTTGATTGTGGTGCCATTGCTTTTGTATGTAGTTTATCCGCCCACGGTGAAGAGCAGCCCAGATGCACCAAAGCTTGCCAGAGAGAAATTGGAAAAGATGGGGCCAATGACCAAGAATGAGATTATAATGGCTGGAACTCTACTTCTCACGTTGCACAGTGGACATGTTAACAGCTGCCTTCCTTATTCTTTGGATCAGGTGGGTCTTTGGGTTTTTGGAGGGGTTCTTAATGTGGATGCTGTTACTGCTGCCATTTTGGGATTGTCTGTTCTTCTTGTGACCGGGGTTGTGACATGGAAAGAGTGCTTGGGAGAAGCTGTTGCCTGGGACACTCTAACGTGGTTTGCTGCACTCATTGCAATGGCAGGGTATCTCAACAAATATGGTCTCATCTCCTGGTTCAGCCAAACTGTAGTGAAGTTTGTTGGCGGTCTAGGTCTTTCGTGGCAGCTCTCATTCGGCATTTTAGTTCTTCTCTATTTCTACTCTCATTACTTCTTTGCAAGTGGAGCTGCTCATATAGGCGCGATGTTTACAGCCTTCTTATCTGTTGCTAGTGCTTTGGGGACTCCCCCCTACTTTGGAGCAATTGTACTTTCCTTCTTATCTAATCTGATGGGTGGCCTAACCCACTACGGAATCGGCTCAGCACCTGTTTTCTATGGTGCCAACTATGTTCCTCTTGCTCAATGGTGGGGCTACGGGTTCCTCGTATCTGTCGTTAACATCATTATCTGGCTCGGTGTTGGAGGAATTTGGTGGAAGGCCATTGGTTTATGGTGA 1770 47.74 MASLALTSSYLPSLRSRLPNSESNARIRCSSLRPSIPKSAIFGSGVRTRFRIPSALSNEAKFVKPALNFGSSGPNLGGFTVRASSSSSSAAAAAVPAPAPQPWQGAAIKPLIASIATGIILWFVPVPSGVSRNAWQLLAIFLATIVGIITQPLPLGAVALLGLGASVLTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCVACGSNVGDGTENRLGAWLMLTCFQTSVISSSMFLTAMAANPLSATLTYNTIKQTIGWTDWAKAAIVPGLISLIVVPLLLYVVYPPTVKSSPDAPKLAREKLEKMGPMTKNEIIMAGTLLLTLHSGHVNSCLPYSLDQVGLWVFGGVLNVDAVTAAILGLSVLLVTGVVTWKECLGEAVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVASALGTPPYFGAIVLSFLSNLMGGLTHYGIGSAPVFYGANYVPLAQWWGYGFLVSVVNIIIWLGVGGIWWKAIGLW 589
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1084708 1089366 + MELO3C014596.2.1 Cme05g00158 327221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme05g00158 589 CDD ArsB_NhaD_permease 145 583 - -
Cme05g00158 589 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 82 589 IPR030676 -
Cme05g00158 589 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 125 583 IPR001898 GO:0016020|GO:0022857|GO:0055085
Cme05g00158 589 Pfam Sodium:sulfate symporter transmembrane region 110 589 IPR001898 GO:0016020|GO:0022857|GO:0055085
Cme05g00158 589 PANTHER DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC 82 589 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme05g00158 Cme-Chr5:1084708 Cme07g01267 Cme-Chr7:17564664 4.74E-140 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme05g00158 - - cmo:103491513 1010.36