Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cme05g00195 ATGTCTTCTTCCGGAATCTCTTCCCAAAGCTCCCAATTGACAGATGCGGTTCAAGGACTAGTTCTTAGCGATCAGAGCGATAAAGATCGGAGGGTTATGACAACTTCTTCCGGAATCTCTATCCAGAGCGCTGAAATTTCAGATGCCGTTCAAGAACAAGTAACTTGCCACCAGTTGGAAATGGGAAAGAAAGTAGAGATTCAAGGAACGGGGCATGGTAGTCACGATGGGGCTTGTGCAATTTGCTTGAATAAGATAGCACTTCAAGAAACTGCTTTAGTAAGAGGCTGTGAGCACGCCTATTGTGCAACTTGCATCCTTCGATGGGCCTCATACACTCAAAAGCCGACTTGTCCACAATGTAAACATCCATTTGAGTTCCTGATCGTTCATCGTTCTCTTGATGGGAGCATCCACGACTACATGTTTGAGGAGAGTGTATGCCTGCTTCTGAGAGCTTCGTGGTATAAACCTCTAATCTTTGAAGAACGGGAGGAAACGTATGATGAGCCTGAGGACGACCAATACTATCATTATGAGGATGATGATGAAGAGTTAGAGGATGCCTACCTGGGTGAATCACCATCTCTCCGCATCGGGAATCGAAGGTGGGGATACAATGGTTACGTGAGGGCAGGTAGACAGGAAGCCCGACCAGTTCTTAGGCAGGAGTTTACTGGAGGACCAAGTTCATCGAGGGATCCCGTAACAAAACAGGCCTCCAAAGACAAAACAGGTCGACGTGCTAAAAGGGCCTTGAAACGGGAAGCAGCAGATAAGGCTGCAGCCGCCAAGCATCAAGAACATCTGGCTAGGTTTGGCCGGAAGTGA 831 47.65 MSSSGISSQSSQLTDAVQGLVLSDQSDKDRRVMTTSSGISIQSAEISDAVQEQVTCHQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYDEPEDDQYYHYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQASKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 276
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 1379232 1382607 + MELO3C014562.2.1 Cme05g00195 327258
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cme05g00195 276 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 44 276 - -
Cme05g00195 276 MobiDBLite consensus disorder prediction 224 276 - -
Cme05g00195 276 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 128 IPR013083 -
Cme05g00195 276 SUPERFAMILY RING/U-box 72 129 - -
Cme05g00195 276 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 44 276 - -
Cme05g00195 276 Pfam Ring finger domain 78 122 IPR001841 -
Cme05g00195 276 ProSitePatterns Zinc finger RING-type signature. 97 106 IPR017907 -
Cme05g00195 276 SMART ring_2 79 121 IPR001841 -
Cme05g00195 276 MobiDBLite consensus disorder prediction 250 276 - -
Cme05g00195 276 ProSiteProfiles Zinc finger RING-type profile. 79 122 IPR001841 -
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme05g00195 - - cmo:103491476 479.559