Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme05g00195 | ATGTCTTCTTCCGGAATCTCTTCCCAAAGCTCCCAATTGACAGATGCGGTTCAAGGACTAGTTCTTAGCGATCAGAGCGATAAAGATCGGAGGGTTATGACAACTTCTTCCGGAATCTCTATCCAGAGCGCTGAAATTTCAGATGCCGTTCAAGAACAAGTAACTTGCCACCAGTTGGAAATGGGAAAGAAAGTAGAGATTCAAGGAACGGGGCATGGTAGTCACGATGGGGCTTGTGCAATTTGCTTGAATAAGATAGCACTTCAAGAAACTGCTTTAGTAAGAGGCTGTGAGCACGCCTATTGTGCAACTTGCATCCTTCGATGGGCCTCATACACTCAAAAGCCGACTTGTCCACAATGTAAACATCCATTTGAGTTCCTGATCGTTCATCGTTCTCTTGATGGGAGCATCCACGACTACATGTTTGAGGAGAGTGTATGCCTGCTTCTGAGAGCTTCGTGGTATAAACCTCTAATCTTTGAAGAACGGGAGGAAACGTATGATGAGCCTGAGGACGACCAATACTATCATTATGAGGATGATGATGAAGAGTTAGAGGATGCCTACCTGGGTGAATCACCATCTCTCCGCATCGGGAATCGAAGGTGGGGATACAATGGTTACGTGAGGGCAGGTAGACAGGAAGCCCGACCAGTTCTTAGGCAGGAGTTTACTGGAGGACCAAGTTCATCGAGGGATCCCGTAACAAAACAGGCCTCCAAAGACAAAACAGGTCGACGTGCTAAAAGGGCCTTGAAACGGGAAGCAGCAGATAAGGCTGCAGCCGCCAAGCATCAAGAACATCTGGCTAGGTTTGGCCGGAAGTGA | 831 | 47.65 | MSSSGISSQSSQLTDAVQGLVLSDQSDKDRRVMTTSSGISIQSAEISDAVQEQVTCHQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYDEPEDDQYYHYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQASKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK | 276 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 1379232 | 1382607 | + | MELO3C014562.2.1 | Cme05g00195 | 327258 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme05g00195 | 276 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 44 | 276 | - | - | |
| Cme05g00195 | 276 | MobiDBLite | consensus disorder prediction | 224 | 276 | - | - | |
| Cme05g00195 | 276 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 66 | 128 | IPR013083 | - | |
| Cme05g00195 | 276 | SUPERFAMILY | RING/U-box | 72 | 129 | - | - | |
| Cme05g00195 | 276 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 44 | 276 | - | - | |
| Cme05g00195 | 276 | Pfam | Ring finger domain | 78 | 122 | IPR001841 | - | |
| Cme05g00195 | 276 | ProSitePatterns | Zinc finger RING-type signature. | 97 | 106 | IPR017907 | - | |
| Cme05g00195 | 276 | SMART | ring_2 | 79 | 121 | IPR001841 | - | |
| Cme05g00195 | 276 | MobiDBLite | consensus disorder prediction | 250 | 276 | - | - | |
| Cme05g00195 | 276 | ProSiteProfiles | Zinc finger RING-type profile. | 79 | 122 | IPR001841 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme05g00195 | - | - | cmo:103491476 | 479.559 |