Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme05g00219 ATGGAACTCAGAAAGTACAAACCCGATCCTCTTTCTCCCGCCTTCCTCCTCCTCCTCCTCCTCCTCCTCTCCATCTCCGGCCGATCCGCCGTCCACGCCTACAAAAACCACACCGTCGGCGATTCCCTCGGCTGGTTCGACAAATTGGAGAAACCTGCCGTCGATTACCAGAAATGGACCGCCGGTAAAACCTTCGGCCTCGGCGATTTTCTAATTTTTAACACGGACAACAATCACTCGGTTGTGCAAACATACAATTTCACCACATACAAACTTTGCGACTACGACGACGCATCAGAAAACGACACGACGGAATGGTCCGCCGCCGATCCATCAGCAACCACTCCCTACGCCGTGATGGTGGCTGTCCCCTTGGTTAAAGAAGGCCCCAACTATTTCTTCTCTGGCAACTACGACGGAGAGCAATGCCAGAATGGGCAACAATTCAAAATAAACGTCACTCATGGACAGGGCCTCCCTAAAAGCATGGGAGATCCTTCGGACGAAGCTCCGGCTCCGGTAGTTCCCGACACCGGCGATCAAACCGAAGCTGCACCCGACACCATTGTCCCTTCCAGCTTCGACAATCCTCGAAACGATGTCGCCGATAACGATAAGGAATCTTCGAGCTCCAATTCTATATCGCTTGTTTATTGCTTCAAGTTTAATGAGTTCTTCTTCTTGTTAATTGGTATTGCCTCTGCCTGCTTTTTGTCTCTGTACTGA 726 50.83 MELRKYKPDPLSPAFLLLLLLLLSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQKWTAGKTFGLGDFLIFNTDNNHSVVQTYNFTTYKLCDYDDASENDTTEWSAADPSATTPYAVMVAVPLVKEGPNYFFSGNYDGEQCQNGQQFKINVTHGQGLPKSMGDPSDEAPAPVVPDTGDQTEAAPDTIVPSSFDNPRNDVADNDKESSSSNSISLVYCFKFNEFFFLLIGIASACFLSLY 241
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1552503 1556819 - MELO3C014540.2.1 Cme05g00219 327282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme05g00219 241 Gene3D - 34 158 IPR008972 -
Cme05g00219 241 PANTHER BNAA08G26900D PROTEIN 12 177 - -
Cme05g00219 241 Pfam Plastocyanin-like domain 45 147 IPR003245 GO:0009055
Cme05g00219 241 SUPERFAMILY Cupredoxins 35 153 IPR008972 -
Cme05g00219 241 MobiDBLite consensus disorder prediction 155 210 - -
Cme05g00219 241 CDD Phytocyanin 35 153 - -
Cme05g00219 241 PANTHER BLUE COPPER PROTEIN 12 177 IPR039391 GO:0009055
Cme05g00219 241 ProSiteProfiles Phytocyanin domain profile. 35 155 IPR003245 GO:0009055
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme05g00219 Cme-Chr5:1552503 Cme03g01843 Cme-Chr3:26762201 1.16E-12 dispersed
Cme05g00219 Cme-Chr5:1552503 Cme11g02525 Cme-Chr11:31722171 2.10E-38 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme05g00219 - - cmo:103491450 484.952