Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cme05g00225 ATGGCGGCTCGAGCTGTTGTTCCTCAGCGACAACTACGAATCAGAGATGAAGGTAAGCCGAAAGTGGTAGCAGCTGAAGGAAGAACAAGAAGAATTCTCAAAGACATAGGCAATCTCGTGCCTGATCAAGCCGTAGAAGGGAAACACGGACCTCAACCACCAGAGAAGAATAAAAGAGCAATCACCAAAAAAATAGATGGAGGAGTTGGGAAGGGAGTTAATGTAACGAAGGCAACAATCACTGAGAAACCAAAGCCGAAACCGAAGACTGTACTCAGCTTGGCCGACGAGGGACACATAATCAACATCAAGGATACTAAATCAAGGGACAAGAATAAGAGATCTCTGACTTCAACACTTAGTGCTAGAAGCAAGGCTGCTTGTGGAATCACCAATAAACCACTGGATTCTTCAGTAGCTAATATTGATGAAGCAGATGCCAACAATGAGTTGGCCGTAGTTGAATACATCGATGACATGTACAAGTTTTACAAGCTTGCAGAAGGTGAGAGCAAAGTATCAGATTACATGGGAACACAACCAGATTTGAATGCTAAGATGAGATCCATTCTCATAGATTGGTTGATAGAAGTCCATCGAAAGTTTGAATTGATGCCGGAAACCCTTTATCTCACTGTAAACATCGTCGATCGATTTCTTTCCTTAAAGACTGTACCAAGGAAGGAACTTCAATTGGTAGGTATCAGCTCTATGCTGATAGCATGCAAATATGAAGAGATTTGGGCCCCAGAGGTCAATGACTTCGTAAGTATATCTGCAAATACTTATCAAAGAGAAGAAATTCTGGTGATGGAGAAAGTAATCTTGGGTAGGCTGGAATGGCTTCTAACTGTTCCTACCCCTTATGTTTTTCTTGTTCGATATGTCAAGGCTTCTGAGCCATCTGATGATGAGGTTAGTTGTGGGATTCTATAA 936 41.99 MAARAVVPQRQLRIRDEGKPKVVAAEGRTRRILKDIGNLVPDQAVEGKHGPQPPEKNKRAITKKIDGGVGKGVNVTKATITEKPKPKPKTVLSLADEGHIINIKDTKSRDKNKRSLTSTLSARSKAACGITNKPLDSSVANIDEADANNELAVVEYIDDMYKFYKLAEGESKVSDYMGTQPDLNAKMRSILIDWLIEVHRKFELMPETLYLTVNIVDRFLSLKTVPRKELQLVGISSMLIACKYEEIWAPEVNDFVSISANTYQREEILVMEKVILGRLEWLLTVPTPYVFLVRYVKASEPSDDEVSCGIL 311
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 1579347 1583147 - MELO3C014534.2.1 Cme05g00225 327288
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cme05g00225 311 SUPERFAMILY Cyclin-like 148 281 IPR036915 -
Cme05g00225 311 ProSitePatterns Cyclins signature. 188 219 IPR006671 -
Cme05g00225 311 PANTHER CYCLINS 22 301 IPR039361 -
Cme05g00225 311 CDD CYCLIN 187 276 IPR013763 -
Cme05g00225 311 PIRSF Cyclin_A_B_D_E 69 309 IPR039361 -
Cme05g00225 311 PIRSF Cyclin_A_B_D_E 2 99 IPR039361 -
Cme05g00225 311 Gene3D - 173 284 - -
Cme05g00225 311 Pfam Cyclin, N-terminal domain 159 283 IPR006671 -
Cme05g00225 311 SMART cyclin_7 193 277 IPR013763 -
Cme05g00225 311 PANTHER CYCLIN-B1-4 22 301 - -
Cme05g00225 311 Gene3D - 170 303 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme05g00225 Cme-Chr5:1579347 Cme08g01425 Cme-Chr8:12648898 9.61E-98 dispersed
Cme05g00225 Cme-Chr5:1579347 Cme04g00381 Cme-Chr4:3058212 1.50E-38 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme05g00225 K21777 - csv:101222873 570.466