Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme05g00299 | ATGCTCTCTTTTTTAGCTGCAATCCTGTTAATAATAACGATTGCTTTTGTGTTGAGAAGCAATAAGAGAAGCAAAAATGTCCCACCAGGGGAAATGGGTCTACCTTGGATTGGAGAAACAATGGCTTTTTACAGAGCTCAAAGTAAAAACAGATTGTTTGAAGACTTTGTTGAGCCAAGAGTAGCAAAATATGGAAAAATCTTCAAAACAAACTTAATGGGATCTCCAACAGTGGTTGTTAATGGAGCTGAAGCCAATAGATTTTTCTTGTCAAATGAGTTTAAGTTAGTGGTAAGTTCATGGCCATCGAGCTCCGTTCAGTTGATGGGTGAAGAATGTATTATGCAGAAGGAAGGTGAAAAGCATAGATGTGTTCGTGGTCTTATTGCCTCAGCTCTGTCTACTTCGAGTCTTGAAGTTATGATGCCTAAACTGTGCAATACAATTCAGGTTTATTTGGATACTAAGTGGGTTGATTGTGACACAGTTGGTCTCTTTCGCTCGGCTAAAGTATTGACATTTACCATTGTGTTTGAGTGTTTATTGGGTATTAAAGTGGAGCCACGTGTGTTAACGACGTTTGAGAGGGTTTTGGAAGGTGTTTTTGCACCACCATTCAGGTTTCCAGGCACAAGATTTTCAAGAGCCAAGAAAGCAAGACTGGAGATAGAGACAATGCTAAGGGAAGTGGTGAGAGAGAAGAGGAGAAAAATTGAAGGAAAACTAGAAGAAGAAGAACAATGTGGGTCATTGCTTTCAAGGATGGTGAGAGCAATGATAGGAGGGGAAATCAGTGAAATGGAAGTCGTAGACAATATTGTTTTGCTTGTTTTTGCAGCTCATGATACGACCTCCTTTGCCATTGCCATGACTTTCAAAATGTTGTCTCAGCACACAAACTGCTACTCACTTCTTCTCCAGGAACACGCTGACATAGTAGCTCGGGAGAGCATTAGATTGTTTCCCCCTATATTTGGTTCTTTCAGGAAAGCCATTTCAGACATTGAATACGAGAGCTTTCTCATTCCCAAAGGATGGAAGGTCTTATGGACAACGTACGGAACACATTATGGAGAAGAGTACTTTGGAGATCCATTGAGTTTCAAGCCAAGCAGATTTGAGGAACCTGTTTCTCAGTATGTTTATGTTCCATTTGGAGGAGGGCCAAGAGCTTGTGCAGGCTACCAGCTAGCGAAATTGAACATACTCATCTTTATACACTCGGTTGTAACCCGTTATGATTGGAGTTTAGTTCATCCAGATGAGCCAATCATAATGGATCCTCTCCCTGTCCCTTGTCATGGAATGCCTATTAAGATTTCTCCAAAATCAGAAATTTGTCCCAATGTTCACCAAATGTAA | 1362 | 40.68 | MLSFLAAILLIITIAFVLRSNKRSKNVPPGEMGLPWIGETMAFYRAQSKNRLFEDFVEPRVAKYGKIFKTNLMGSPTVVVNGAEANRFFLSNEFKLVVSSWPSSSVQLMGEECIMQKEGEKHRCVRGLIASALSTSSLEVMMPKLCNTIQVYLDTKWVDCDTVGLFRSAKVLTFTIVFECLLGIKVEPRVLTTFERVLEGVFAPPFRFPGTRFSRAKKARLEIETMLREVVREKRRKIEGKLEEEEQCGSLLSRMVRAMIGGEISEMEVVDNIVLLVFAAHDTTSFAIAMTFKMLSQHTNCYSLLLQEHADIVARESIRLFPPIFGSFRKAISDIEYESFLIPKGWKVLWTTYGTHYGEEYFGDPLSFKPSRFEEPVSQYVYVPFGGGPRACAGYQLAKLNILIFIHSVVTRYDWSLVHPDEPIIMDPLPVPCHGMPIKISPKSEICPNVHQM | 453 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 2208479 | 2211858 | - | MELO3C014463.2.1 | Cme05g00299 | 327362 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme05g00299 | 453 | SUPERFAMILY | Cytochrome P450 | 21 | 442 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme05g00299 | 453 | PANTHER | TAXADIENE 5-ALPHA HYDROXYLASE | 13 | 442 | - | - | |
Cme05g00299 | 453 | Coils | Coil | 216 | 236 | - | - | |
Cme05g00299 | 453 | PRINTS | E-class P450 group I signature | 268 | 285 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme05g00299 | 453 | PRINTS | E-class P450 group I signature | 382 | 392 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme05g00299 | 453 | PRINTS | E-class P450 group I signature | 351 | 375 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme05g00299 | 453 | PRINTS | E-class P450 group I signature | 61 | 80 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme05g00299 | 453 | PRINTS | E-class P450 group I signature | 392 | 415 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme05g00299 | 453 | PANTHER | CYTOCHROME P450 26 | 13 | 442 | - | - | |
Cme05g00299 | 453 | Gene3D | Cytochrome P450 | 17 | 443 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme05g00299 | 453 | Pfam | Cytochrome P450 | 28 | 428 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme05g00299 | 453 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 385 | 394 | IPR017972 | GO:0005506|GO:0016705 | |
Cme05g00299 | 453 | PRINTS | P450 superfamily signature | 383 | 392 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme05g00299 | 453 | PRINTS | P450 superfamily signature | 392 | 403 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme05g00299 | 453 | PRINTS | P450 superfamily signature | 312 | 323 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme05g00299 | 453 | PRINTS | P450 superfamily signature | 279 | 296 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme05g00299 | Cme-Chr5:2208479 | Cme06g01445 | Cme-Chr6:13470519 | 7.93E-88 | dispersed | |
Cme05g00299 | Cme-Chr5:2208479 | Cme01g00047 | Cme-Chr1:374836 | 3.48E-66 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme05g00299 | - | - | csv:101220115 | 842.032 |