Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme05g00319 ATGAGGAAGAGGGAAAGAGAGAACCCTTGTGGGGTTTGTGGCCATTATCACAAATATGAAGAAGGGGAAGTTTGTGGGATTTGTGGTCATCGTGTTCCTGCTACATCGGAGAAAACTTCTTTGCAAGTTAGTGCTTTTCCTTCCGAGATCTTGCCGGAGTTTCTTTATTTGGGAAGCTATGATAACGCTTCACGCTCAGAACTTTTGAAGACTCAAGGAATCTCCCGCGTTCTTAACCTTCATGGTTTGGTTATCTTGTTTCTTGTTTCGTCTCCAGCTATTGTTATAGCATTCTTGATGAAATGTAAAGGTTGGAGACTTGCTCAGGGTTATCAATGGGTGAAAGAACGGAGGCCGTCTGTTGAGTTAACTGAATCTATTTATCAGCAGCTGCAAGCGTATGAGCAGAAGGTTTTTGGATTACCAGAAAACTCCCTCCCAACCCTGCAAATCTTCCCTCCTGTTGGTCCGCCTTCGTTTGGCTTTGGCTTCCCAAAGACTGGCGACCCAGTTCCTATAACTCCATTCAACACCATTGGTGCAACATCAATCTTCTCCCGCCCGACCATAGATGTACCTTCCCACGAGTTTACATTTGGTGCTGGCCAAACTCAAAACAGTTTCTCTTCAAATCCCTTTGGCGCCAATCCACGAAACTCAACCAGCAGCAACATCCAAATGGACAGTGCATAA 693 45.17 MRKRERENPCGVCGHYHKYEEGEVCGICGHRVPATSEKTSLQVSAFPSEILPEFLYLGSYDNASRSELLKTQGISRVLNLHGLVILFLVSSPAIVIAFLMKCKGWRLAQGYQWVKERRPSVELTESIYQQLQAYEQKVFGLPENSLPTLQIFPPVGPPSFGFGFPKTGDPVPITPFNTIGATSIFSRPTIDVPSHEFTFGAGQTQNSFSSNPFGANPRNSTSSNIQMDSA 230
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2355970 2358794 + MELO3C014446.2.1 Cme05g00319 327382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme05g00319 230 Gene3D Protein tyrosine phosphatase superfamily 30 85 IPR029021 -
Cme05g00319 230 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 90 229 - -
Cme05g00319 230 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 1 80 - -
Cme05g00319 230 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 90 229 IPR044212 GO:0009734|GO:0009738|GO:0033549|GO:0043407
Cme05g00319 230 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 1 80 IPR044212 GO:0009734|GO:0009738|GO:0033549|GO:0043407
Cme05g00319 230 MobiDBLite consensus disorder prediction 201 230 - -
Cme05g00319 230 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 91 141 IPR029021 -
Cme05g00319 230 Gene3D Protein tyrosine phosphatase superfamily 90 146 IPR029021 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme05g00319 K04459 - csv:101211000 404.445