Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme05g00359 ATGGAAGGAATATTGCAATTTGCTGTTCAATCTGTTGAATGGACTTATTCTCTCTTCTGGCGTTTCTCTACTCAACAAAGGATGTTGGTTTGGGGAGATGGCTTCTACAATGGCCCTATCAAGACCACCAAGACCCTCCACCCTGCCGCCGCCGCCCAACAACAACACCAACAACATCAACATTCTGCCTCTCTTTCACTTCACAGAACCCATCAGCTTACGGATCTCTATAACTCCTTATCCGCCTCCGACACCCTCCGTCGCCCCACCTCCGCCGCTCTCTCCCCCGAGGACTTGACTGAGACTGAGTGGTTCTATTTGTTGTGTCTCTCTTTCTCTTTTCCTCCGGGGTTCGGATTGCCTGGAAAGGCATATTGCAAGAAGAAACATGTGTGGATAACAGGTGCAAATGAGATTGACAGTAAAATTTTCTCTAGAGCCATTCTTGCTAAGGTA 456 48.03 MEGILQFAVQSVEWTYSLFWRFSTQQRMLVWGDGFYNGPIKTTKTLHPAAAAQQQHQQHQHSASLSLHRTHQLTDLYNSLSASDTLRRPTSAALSPEDLTETEWFYLLCLSFSFPPGFGLPGKAYCKKKHVWITGANEIDSKIFSRAILAKV 152
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2860112 2861076 + MELO3C031122.2.1 Cme05g00359 327422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme05g00359 152 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 151 IPR025610 -
Cme05g00359 152 PANTHER TRANSCRIPTION FACTOR TT8 5 151 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme05g00359 Cme-Chr5:2860112 Cme11g02159 Cme-Chr11:28989269 1.36E-34 dispersed
Cme05g00359 Cme-Chr5:2860112 Cme04g00117 Cme-Chr4:902979 2.12E-15 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme05g00359 - - csv:101213187 288.885