Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme05g00386 ATGGCTTCTGAGTCTGGCAGTGTTGATTATACTCAACGTGCTCAGTGGCTCCGAGCAGCAATCCTAGGGGCCAATGATGGGCTCGTCTCTGTTGCTTCGCTCATGATGGGCGTCGGAGCCGTGAAGCCCGACGCCAAAGCCATGCTTATTGCTGGATTTGCTGGACTGGTTGCCGGAGCTTGTAGTATGGCCATAGGGGAGTTTGTCTCAGTTTATACTCAATATGATATTGAGAAAGCTCAGCTGAAGAGAAATGGGAAGGAAAAGAATAATAACATGGAACCAAAACAGCCGGGCGAGGAGGAAGAGAAGCTGCCGAATCCACTACAGGCTGCACTGGCATCGGCGATAGCGTTTTCGGTGGGAGCAGTCATTCCTTTGGTGGCAGCAGTGTTTATCCGAGACCATAAGGTGAGGCTGGGGGTGGTGGCAGCGGTGGCGAGCTTGACGCTATTGGTTTTTGGGATAGTTGGAGCCATCTTGGGGAGAACTCCGGTTGGAAAATCAGCGGCAAGAGTGGTGGTTGGAGGGTGGATGGCTATGGCCATTACTTTTGGCCTTACGAAGCTGCTTGGGTCTAAGGGACTATGA 591 52.28 MASESGSVDYTQRAQWLRAAILGANDGLVSVASLMMGVGAVKPDAKAMLIAGFAGLVAGACSMAIGEFVSVYTQYDIEKAQLKRNGKEKNNNMEPKQPGEEEEKLPNPLQAALASAIAFSVGAVIPLVAAVFIRDHKVRLGVVAAVASLTLLVFGIVGAILGRTPVGKSAARVVVGGWMAMAITFGLTKLLGSKGL 196
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3067159 3068297 + MELO3C014380.2.1 Cme05g00386 327449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme05g00386 196 Pfam VIT family 102 188 IPR008217 GO:0005384|GO:0030026
Cme05g00386 196 Pfam VIT family 17 94 IPR008217 GO:0005384|GO:0030026
Cme05g00386 196 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 4 193 IPR008217 GO:0005384|GO:0030026
Cme05g00386 196 MobiDBLite consensus disorder prediction 83 103 - -
Cme05g00386 196 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 4 193 - -
Cme05g00386 196 MobiDBLite consensus disorder prediction 83 105 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g00326 Cme-Chr3:4245196 Cme05g00386 Cme-Chr5:3067159 2.06E-91 dispersed
Cme05g00386 Cme-Chr5:3067159 Cme10g01577 Cme-Chr10:20827246 1.41E-11 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme05g00386 K22736 - csv:101214875 367.851