Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme05g00464 | ATGGAAGAGGTTGAAGAAGCTACCAAATCAGCCATTGAGAGCTGCCATGGAGTTTTGAATCTTTTACTTCAACCTCCTCCTTCTCCTCCTCATCAACACCATTTCAAAAATTTAATGGTTGAAACTAAAGAAGCTGTTTTCAAGTTCAAGAAAGTGATTTCTCTTTTGAATTCTGATTTTAGTCATCCAAGATTTAGAAATTTCAACAAAATCCCTCTCCCTTTACCTCAAAATTCCCTATTGGATTCCCCTAATTACACTCTACATCCTCCAAACAAAAATCTTTTCAATTTCCCCCCTGGTTCTAATAGTAAAGTTTCAATTTTTTTGGGAAACCCAGATTTAGAATTGAGTCAAAATGATAAGAATACCCTTCATATCCCCAAACAATCTCCTTCTTTAAACTTTAGCTTCCCCCATCATCATCATCATCAACAACAACAACAACAACAGAGCGTTCTAGCTCATCAGAAACAAATGAAACAGCAAGCTGAAATGACGTTTCTTAGGAATAACAATGGGATGAATCTGAATTTTGATACATCTAACTGTACATTGACAATGTCATCAGCTAGATCTTTCATTTCTTCATTGAGTATGGATGGCAGCGTCATTGGCGACAGAAGCTCGTTTCATTTGATTGGACCGTCGACCACGACCACGACAACGTCGGGCAATAGCAAGAGGAAGTTTTCTGCTAGAGGAGAAGAAGGGAGCTTGAAATGTGGAAGCACTAGTAAATGCCATTGTTCAAAGAAGAGGAAACATAGAGTGAAGAGATCAATAAAAGTACCTGCCATAAGTAACAAACTTGCAGATATTCCTTCCGATGATTATTCATGGAGAAAATATGGGCAGAAGCCAATTAAGGGTTCTCCTCATCCAAGGGGTTACTACAAATGCAGCAGCATAAGAGGTTGTCCGGCAAGAAAGCATGTCGAGCGGTGCTTAGAAGACCCGTCGATGCTTATTGTAACGTACGAAGGAGAACATAGTCACCCGAAAATGTTGACGCAATCTGCACACACTTAG | 1032 | 39.44 | MEEVEEATKSAIESCHGVLNLLLQPPPSPPHQHHFKNLMVETKEAVFKFKKVISLLNSDFSHPRFRNFNKIPLPLPQNSLLDSPNYTLHPPNKNLFNFPPGSNSKVSIFLGNPDLELSQNDKNTLHIPKQSPSLNFSFPHHHHHQQQQQQQSVLAHQKQMKQQAEMTFLRNNNGMNLNFDTSNCTLTMSSARSFISSLSMDGSVIGDRSSFHLIGPSTTTTTTSGNSKRKFSARGEEGSLKCGSTSKCHCSKKRKHRVKRSIKVPAISNKLADIPSDDYSWRKYGQKPIKGSPHPRGYYKCSSIRGCPARKHVERCLEDPSMLIVTYEGEHSHPKMLTQSAHT | 343 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 4242020 | 4244128 | + | MELO3C014305.2.1 | Cme05g00464 | 327527 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme05g00464 | 343 | Gene3D | WRKY domain | 262 | 335 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cme05g00464 | 343 | Pfam | Plant zinc cluster domain | 237 | 273 | IPR018872 | - | |
Cme05g00464 | 343 | ProSiteProfiles | WRKY domain profile. | 270 | 336 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cme05g00464 | 343 | PANTHER | WRKY TRANSCRIPTION FACTOR 74-RELATED | 2 | 343 | - | - | |
Cme05g00464 | 343 | SMART | WRKY_cls | 275 | 335 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cme05g00464 | 343 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 2 | 343 | IPR044810 | GO:0003700 | |
Cme05g00464 | 343 | Pfam | WRKY DNA -binding domain | 277 | 334 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cme05g00464 | 343 | SUPERFAMILY | WRKY DNA-binding domain | 273 | 334 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cme01g02020 | Cme05g00464 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme01g02020 | Cme-Chr1:28771807 | Cme05g00464 | Cme-Chr5:4242020 | 6.15E-114 | dispersed | |
Cme02g00670 | Cme-Chr2:7982031 | Cme05g00464 | Cme-Chr5:4242020 | 6.95E-14 | dispersed | |
Cme02g00671 | Cme-Chr2:7982031 | Cme05g00464 | Cme-Chr5:4242020 | 6.95E-14 | dispersed | |
Cme05g00464 | Cme-Chr5:4242020 | Cme11g00698 | Cme-Chr11:8243822 | 4.92E-51 | dispersed | |
Cme05g00464 | Cme-Chr5:4242020 | Cme08g00590 | Cme-Chr8:3758983 | 7.86E-55 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
41329 | PF03106 | WRKY | 5.90E-26 | CL0274 | Cme | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme05g00464 | - | - | csv:101214847 | 628.246 |