Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme05g00489 ATGAGTGCCGGTGCGGCGACGTTCCGGTCTATACTCGACAAACCCCTCAACCAGTTGACGGAGGATGACATTTCGCAGCTCACTCGAGAGGATTGTCGCAAATACCTAAAAGAAAAAGGAATGCGGCGGCCCTCATGGAACAAATCTCAGGCGATCCAGCAGGTTATTTCTCTTAAAGCATTGCTTGAGCCTTGTGATGATTCCGGCGCCGGTGCTCTCAGGAAGGTCGTCGTTTCGCCTCGGATAAATTCCAATCAAGGTGATTCACCCAAAGAACCGAGTGATGATGCTCAGGTTACAATGTCAGTTGATGAATCTGCTTATAGCAATGTGGAGACTGCGAAATCTACTCCTGAGGATCCTCCGGTTGAACCAGAGAACAATGTCACTAGTCCCAGAGATCAATACGATACAAATGGAGTGGATGGCCAAATGACAATTTTCTATTGTGGCAAGGTGAATGTGTATGATGGAGTTCCACCAGATAAGGCGTGGGCAATCATGCATCTTGCAGCTAGTCCTATTCATTTCCCTCAGAATCATCCCTTGAGTGGAACTGCTGCATGTCAGTCTCCACCATGTCTTTTGCAGACTTCCAGTGACAGAGATGACTTTTTTCCTCCTAGTGCTACCATCTATCGGAATGTGAACACAGAGAAGTTGGGTGAGCATCCTCAGCAGCAGCAGCATGCAAAGGGAACCAGTATGCGGGATTCTGGATTGTCGTCTCCTAGCCTGGAGGGATATATGAACCATCAAATGAGGACGCACATATCCAATAAGAATTTAGGTCAGATTGTGACGAGCTCTTTATCCCCAACTGGAGTAGCAAAAGCCTTCGTTGGAGGACCAGCTGACAATCAGCCAAAACTTGCTTGTTTTTCTGTCGACCTTAATGTCAAAGATATCCAGGAGTGCTGA 921 47.23 MSAGAATFRSILDKPLNQLTEDDISQLTREDCRKYLKEKGMRRPSWNKSQAIQQVISLKALLEPCDDSGAGALRKVVVSPRINSNQGDSPKEPSDDAQVTMSVDESAYSNVETAKSTPEDPPVEPENNVTSPRDQYDTNGVDGQMTIFYCGKVNVYDGVPPDKAWAIMHLAASPIHFPQNHPLSGTAACQSPPCLLQTSSDRDDFFPPSATIYRNVNTEKLGEHPQQQQHAKGTSMRDSGLSSPSLEGYMNHQMRTHISNKNLGQIVTSSLSPTGVAKAFVGGPADNQPKLACFSVDLNVKDIQEC 306
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4503421 4508299 + MELO3C014283.2.1 Cme05g00489 327552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme05g00489 306 ProSiteProfiles Tify domain profile. 138 173 IPR010399 -
Cme05g00489 306 MobiDBLite consensus disorder prediction 109 138 - -
Cme05g00489 306 MobiDBLite consensus disorder prediction 219 247 - -
Cme05g00489 306 SMART tify_2 138 173 IPR010399 -
Cme05g00489 306 PANTHER PROTEIN TIFY 4B-LIKE ISOFORM X1 4 204 - -
Cme05g00489 306 Pfam tify domain 144 172 IPR010399 -
Cme05g00489 306 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 4 204 IPR040390 -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
41331 PF06200 tify 2.60E-15 No_clan Cme TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme05g00489 - - csv:101204377 590.882