Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme05g00518 | ATGGCTCGGGACGGGCATGTAGTGCCGGTTGATCCACAGACGGCGCTTACTGTGAAGAAGAAGAAACAATCTTCTAGGAATTGGATTTTACTGGATTGTACGGGCCAAGGGACCGTCCTTGATGTCGATAAGCATGCTATTATGCATCGAGTTCAAATTCATGCTCGTGACCTTCGGATTCTTGATCCTTTGCTTTCTTATCCCTCCACGATTTTGGGGCGTGAGAGGGCCATTGTTCTTAATCTCGAGCACATAAAGGCGATCATTACTGCTGATGAGGTTTTGCTAAGAGATCCGACAGATGAACATATCATCCCTGTGGTTGAGGAGCTTCAGAGGCGACTGCCTCTTTCTAATGGCTTCCAGTTTCAAGTTCAAGGAGATGGTAAAGAGTATCAGAGTGGCCAACAAGATGGTGAAGCTGAAGAAGATGACTCGCCATTTGAATTTCGTGCCCTTGAGGTAGCATTGGAAGCTATATGTAGTTTTCTTGCTGCACGGACAACTGAACTGGAGACT | 519 | 46.44 | MARDGHVVPVDPQTALTVKKKKQSSRNWILLDCTGQGTVLDVDKHAIMHRVQIHARDLRILDPLLSYPSTILGRERAIVLNLEHIKAIITADEVLLRDPTDEHIIPVVEELQRRLPLSNGFQFQVQGDGKEYQSGQQDGEAEEDDSPFEFRALEVALEAICSFLAARTTELET | 173 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 4841371 | 4843538 | + | MELO3C026764.2.1 | Cme05g00518 | 327581 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme05g00518 | 173 | PANTHER | RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL | 1 | 173 | IPR039204 | - | |
| Cme05g00518 | 173 | Gene3D | Magnesium transport protein CorA, transmembrane region | 104 | 173 | - | - | |
| Cme05g00518 | 173 | Gene3D | - | 13 | 99 | - | - | |
| Cme05g00518 | 173 | PANTHER | MAGNESIUM TRANSPORTER MRS2-I | 1 | 173 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme05g00518 | Cme-Chr5:4841371 | Cme06g01215 | Cme-Chr6:9770716 | 1.44E-36 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme05g00518 | K16075 | - | csv:101203841 | 335.88 |