Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme05g00704 ATGGGTGGTGATGGAAAGCTCTATACATTGGCTGAAGTCTCTCAGCACAATAATCCCAAGGACTGTTGGTTGATCATCAATGGCAAGGTTTACAATGTAACCGAGTTCTTGGAAGACCATCCCGGTGGCGACGAGGTTTTGTTGTCTGGCACAGGTAAGGATGCAACTGATGATTTCGAAGACGTGGGTCATAGTGAGAGCGCAAGAGAAATGATGAGCAAATACTACATTGGAGAGATCGACATCTCAACAATCCCAGAACAGTTGACATACACAGGTCCAAAGCAGCCTCATTACAATCAGGATAAGACAACTGAGTTCATCATTAAGCTCCTCCAGTTCTTGGTTCCTCTTGCAATCTTGGGATTGGCGGTTGGTATCCGCTTTTACAACAAATCAAGCTGA 405 44.94 MGGDGKLYTLAEVSQHNNPKDCWLIINGKVYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEIDISTIPEQLTYTGPKQPHYNQDKTTEFIIKLLQFLVPLAILGLAVGIRFYNKSS 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8215431 8219211 - MELO3C020457.2.1 Cme05g00704 327767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme05g00704 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Cme05g00704 134 SMART Cyt_b5_2 8 81 IPR001199 -
Cme05g00704 134 Gene3D - 3 85 IPR036400 -
Cme05g00704 134 PANTHER CYTOCHROME B5 1 132 - -
Cme05g00704 134 PANTHER CYTOCHROME B5-LIKE 1 132 - -
Cme05g00704 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Cme05g00704 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Cme05g00704 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Cme05g00704 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Cme05g00704 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Cme05g00704 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Cme05g00704 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 6 92 IPR036400 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme05g00704 Cme-Chr5:8215431 Cme09g02007 Cme-Chr9:23822042 7.90E-51 dispersed
Cme03g01456 Cme-Chr3:23847288 Cme05g00704 Cme-Chr5:8215431 1.09E-34 transposed
Cme04g01532 Cme-Chr4:22065146 Cme05g00704 Cme-Chr5:8215431 1.85E-64 transposed
Cme09g00850 Cme-Chr9:11283247 Cme05g00704 Cme-Chr5:8215431 2.13E-18 transposed
Cme11g02195 Cme-Chr11:29263895 Cme05g00704 Cme-Chr5:8215431 9.45E-12 transposed
Cme05g00704 Cme-Chr5:8215431 Cme06g00386 Cme-Chr6:2431054 2.38E-75 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme05g00704 K23490 - csv:101213506 269.626