Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme05g00789 ATGAGGACAGGAAACCAAAAGAGGAAGCTGAGGCTAAGCAAGATCTATTCATTTGCTTGTGGGAGAACATCATTGAAAGATGAAGACCATTCACAAATTGGGGCGCCCGGGTTTTCACGAGTGGTTTTCTGTAATGATCCTAATTGTTTGGAGTCTGAAATGCGTAATTATGTTGACAATTCCATCAGGTCTACAAAGTATACACCTATCAATTTTTTGCCCAAGTCCTTGTTTGAGCAGTTCAGGAGGGTGGCTAATTTTTACTTCTTGGTTGCTGGAATACTAGCCTTCACTCCTCTTGCTCCTTTTACTGCCGTTAGTGCAATTATCCCTCTTATTGCAGTCATTACCGCCACAATGATTAAAGAAGGTATTGAAGATTGGCGACGACAGTCACAGGATATTGAGGTAAATAACAGAAAGGTTAAGGTTCATCAAGGCAATGGAGTCTTTGATTTTACTGAATGGAAAACTTTGAGGGTCGGAGATATAGTGAAGGTTGAAAAGGATCAATACTTTCCTGCCGACCTTCTTTTGATTTCATCATGCTATGAGGATGGAATCTGTTACGTAGAAACAATGAACCTTGATGGGGAAACAAATCTGAAGGTAAAGCAAGCATTGGATGCAACTGCATTTGCAAATGAGGATTCTAACTTCCGTGATTTTAAGGCTACAATCAAATGTGAAGACCCAAATGCAAATCTTTATACCTTTGTAGGAAGCATGGACTTTGAAGAGCAACAATATCCACTTTCCCCACAAAATCTTCTCTTGAGAGACTCCAAACTTCGAAACACAGAATATATATATGGGGTTGTTGTCTTTACTGGTCAAGATTCAAAGGTTATTCAAAATTCTACTGATCCGCCTTCCAAGAGAAGCAAAGTTGAGAAGAAGATGGATAAAATCATATATCTACTGTTTGGCATTCTATTCATTCTGGCATTTGTTGGATCTATAGTCTTCGGTGTCGTGACTAAAGATGATCTGAAAAATGGAAGGAGTAAGAGATGGTATCTTAATCCCGAACATTCTACTATTTTCTTTGATCCTGAGAATGCACCAGCTGCTGCAATTTTTCACTTTCTTACTGCACTGATGTTGTATAACTACTTTATACCTATATCATTGTATGTGTCTATTGAGATTGTCAAAGTTCTTCAGAGTATCTTCATCAATCAAGACATACACATGTACTATGAAGAATCTGACAAACCAGCACATGCCCGCACCTCAAATTTGAATGAGGAACTTGGTCAAGTTGACACTATACTCTCTGACAAGACTGGCACTTTGACCTGTAACTCAATGGAGTTTATCAAGTGTTCTGTGGCTGGAACAGCTTATGGCAGTGGTATCACTGAAACTGAGAGAGCTATGGAAGCCAGAAATGGTATGCCAATGCTTAATGGTAATGGCAATGGAAATACCTATAAGCGTAATGAGGATGCTACAGATACAAATCCCCCTGTCAAAGGGTTCAATTTTAAGGACAAAAGGATTATGAACGGAAAATGGGTTAATGAACCTCATGCAGATGTCATCCAGAAGTTCTTCCGCCTCCTTGCAACTTGTCATACAGCTATTCCCGATGTGGATGAAAACACGGGAAAGGTTTCATATGAAGCAGAATCGCCAGATGAAGCAGCATTTGTAATTGCTGCCAGAGAAATTGGTTTTGAATTCTATCAGAGGACACAGACAAGTATTTCAATTCGTGAATTGGATCCTAGGTCTGGAAGGAAGGTGGAAAGGTCATATAAGCTTTTAAATGTTTTGGAGTTTAATAGCGCACGAAAGAGGATGTCTGTCATAATTAGAGATGAAGAAGGAAAAATACTATTACTATGCAAAGGTGCCGACAGTGTAATGTTTGAGAGGCTTGCGAAGAATGCTAGCAAATTTGAAGAGAAAACAAAGGAGCATATCAATGAATATGCTGATGCAGGCCTTCGGACCTTGGTACTTGCTTATCGTGAACTTGATGAGGTGGAATACAAGGAATTTGACAGGAAATTCTATGAAGCAAAAAATTCAGTTAGTGCAGAGAGGGAGTCAACGATTGATAAAGTAACAGATCGCATTGAAAGGAATTTAATTCTTCTTGGTTCCACGGCAGTTGAGGACAAGCTTCAAAATGGGGTCCCTGAATGCATAGACAAACTTGCTCAAGCTGGGATTAAGATCTGGGTTTTGACTGGGGACAAGATGGAGACTGCGATCAATATTGGTTTTGCCTGTAGTTTGCTCAGACAAGGAATGAAACAGATTATTATAACTCTGGAGACACCAGAAATTCAAGCCTTAGAAAGGACGGGGGAGAAGGATATGATCACTAAGGCATCAAAAGATAGTATCGTCCACAAGATAACTCGGGCAAGATCTCAGCTCACTGCATCAAGTGGAAGCTCTGAGGCTTATGCATTGATAATTGATGGCAAATCACTTACTTATGCTCTAGAGGATGATGTGAAGAATGTATTCCTTGACCTTGCAATTGGATGTGCGTCCGTTATTTGTTGTCGCTCATCTCCAAAGCAAAAGGCAATGGTCACTAAGTTGGTCAAACTTGCAACGGGAAAAACAACATTAGCAATTGGTGATGGTGCGAATGATGTTGGAATGCTTCAAGAAGCAGATATTGGAGTTGGAATCAGTGGCGCCGAAGGGATGCAGGCGGTCATGTCGAGTGATATCGCAATTGCTCAGTTCAAATATTTGGAGCGTCTTTTACTTGTGCATGGACATTGGTGTTACAGGAGATTATCATCAATGATATGCTACTTTTTCTACAAGAATTTCACGTTCGGTTTTACGCTTTTCTTATACGAGGCATACACTTCGTTCTCTGGAACCCCTGCATATAACGACTGGTTTATGTCACTCTACAACGTCCTGTTCTCATCTCTTCCAGTTGTGGCCCTCGGGGTGTTTGACCAAGACGTTTCTGCAAGATACTGCCTCAAGTATCCTATGTTGTACCAACAAGGTGTGCAGAACGTTCTCTTTAACTGGGCTAGGATCCTCGGCTGGATGTTTAATGGTCTGTGTAGTGCATTGATCATTTTCTTTTTCTGCACAAGTGGAATGGAGCATCAAGCATTTAATTCCGAAGGGAAAACCGTGGGGAGGGATGTTCTAGGAGCAACAATGCTGTCATGTGTTGTTTGGGTTGTCAACTTGCAGATGGCACTCTCTGTTAGCTACTTCACTTTGATACAACATATTTTCATTTGGGCTTCAATCTTTATCTGGTACCTTTTTCTGATGATATATGGAGCCTTTCCTGCCAGCATTTCGACAAATGCATATCGCGTGTTCCTAGAAGCCCTTGCTCCTGCCGGGTCTTATTGGCTTCTACTGATATTTGTGGTGATCTCTGCTCTCACTCCATTCTTTGTATACTCAGCATTACAGTTGAATTTCTTTCCCATGTACCATGAAAAAATACAATGGATAAGGCATGACGGTCAGGGGCAGATAGATGATCCCGAGTTTGTCCATATGGTCAGGCAAAGCTCGTTGAGACCAACAACTGTGGGTTTCACAGCTCGTTTGGCAGCCAAAATAAGAAAAGAAAAATCGTAG 3591 40.88 MRTGNQKRKLRLSKIYSFACGRTSLKDEDHSQIGAPGFSRVVFCNDPNCLESEMRNYVDNSIRSTKYTPINFLPKSLFEQFRRVANFYFLVAGILAFTPLAPFTAVSAIIPLIAVITATMIKEGIEDWRRQSQDIEVNNRKVKVHQGNGVFDFTEWKTLRVGDIVKVEKDQYFPADLLLISSCYEDGICYVETMNLDGETNLKVKQALDATAFANEDSNFRDFKATIKCEDPNANLYTFVGSMDFEEQQYPLSPQNLLLRDSKLRNTEYIYGVVVFTGQDSKVIQNSTDPPSKRSKVEKKMDKIIYLLFGILFILAFVGSIVFGVVTKDDLKNGRSKRWYLNPEHSTIFFDPENAPAAAIFHFLTALMLYNYFIPISLYVSIEIVKVLQSIFINQDIHMYYEESDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGSGITETERAMEARNGMPMLNGNGNGNTYKRNEDATDTNPPVKGFNFKDKRIMNGKWVNEPHADVIQKFFRLLATCHTAIPDVDENTGKVSYEAESPDEAAFVIAAREIGFEFYQRTQTSISIRELDPRSGRKVERSYKLLNVLEFNSARKRMSVIIRDEEGKILLLCKGADSVMFERLAKNASKFEEKTKEHINEYADAGLRTLVLAYRELDEVEYKEFDRKFYEAKNSVSAERESTIDKVTDRIERNLILLGSTAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIITLETPEIQALERTGEKDMITKASKDSIVHKITRARSQLTASSGSSEAYALIIDGKSLTYALEDDVKNVFLDLAIGCASVICCRSSPKQKAMVTKLVKLATGKTTLAIGDGANDVGMLQEADIGVGISGAEGMQAVMSSDIAIAQFKYLERLLLVHGHWCYRRLSSMICYFFYKNFTFGFTLFLYEAYTSFSGTPAYNDWFMSLYNVLFSSLPVVALGVFDQDVSARYCLKYPMLYQQGVQNVLFNWARILGWMFNGLCSALIIFFFCTSGMEHQAFNSEGKTVGRDVLGATMLSCVVWVVNLQMALSVSYFTLIQHIFIWASIFIWYLFLMIYGAFPASISTNAYRVFLEALAPAGSYWLLLIFVVISALTPFFVYSALQLNFFPMYHEKIQWIRHDGQGQIDDPEFVHMVRQSSLRPTTVGFTARLAAKIRKEKS 1196
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9872982 9881081 + MELO3C020394.2.1 Cme05g00789 327852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme05g00789 1196 Pfam Phospholipid-translocating P-type ATPase C-terminal 895 1145 IPR032630 -
Cme05g00789 1196 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 833 950 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cme05g00789 1196 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 434 666 IPR023299 GO:0000166
Cme05g00789 1196 CDD P-type_ATPase_APLT_Dnf-like 59 1027 - -
Cme05g00789 1196 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1152 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Cme05g00789 1196 SUPERFAMILY Calcium ATPase, transmembrane domain M 56 1144 IPR023298 -
Cme05g00789 1196 SUPERFAMILY HAD-like 421 922 IPR036412 -
Cme05g00789 1196 SFLD Haloacid Dehalogenase 408 918 - -
Cme05g00789 1196 SUPERFAMILY Calcium ATPase, transduction domain A 141 285 IPR008250 -
Cme05g00789 1196 Pfam E1-E2 ATPase 139 380 - -
Cme05g00789 1196 ProSitePatterns E1-E2 ATPases phosphorylation site. 428 434 IPR018303 -
Cme05g00789 1196 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED 5 1194 - -
Cme05g00789 1196 Pfam Cation transport ATPase (P-type) 535 629 - -
Cme05g00789 1196 Gene3D - 551 682 IPR023299 GO:0000166
Cme05g00789 1196 PRINTS P-type cation-transporting ATPase superfamily signature 426 440 - -
Cme05g00789 1196 PRINTS P-type cation-transporting ATPase superfamily signature 867 886 - -
Cme05g00789 1196 Pfam Phospholipid-translocating ATPase N-terminal 42 108 IPR032631 -
Cme05g00789 1196 Gene3D - 112 288 - -
Cme05g00789 1196 Gene3D - 699 907 IPR023214 -
Cme05g00789 1196 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 5 1194 - -
Cme05g00789 1196 SFLD p-type atpase 408 918 IPR044492 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g02833 Cme-Chr1:35261203 Cme05g00789 Cme-Chr5:9872982 0 dispersed
Cme05g00789 Cme-Chr5:9872982 Cme10g00473 Cme-Chr10:2997439 0 dispersed
Cme12g01905 Cme-Chr12:25161524 Cme05g00789 Cme-Chr5:9872982 2.31E-69 dispersed
Cme05g00789 Cme-Chr5:9872982 Cme10g00310 Cme-Chr10:2035551 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme05g00789 K01530 - csv:101205800 2319.27