Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme05g00800 ATGGAAGAGAAAGACGACTTACCGGCCGAGGGAGATTTGAGAATTGCGCCAACAGCTTCTTTGAACGGATATAGTTCTGCATCTGCGCTTGCAATCTTAACTTCTAAGGAGGATTTAATTTCAAGACATACGGAGAGATTTGCTGGTCCAACTTCAATGGACCATATAAGGTGTCCAGAGCATTACTCAAATTATGGGAATAAGGATTTGAGACGTTCGGGTCAGAGTTTTGATAGATCTCGTCCAATTTTGACCCCAAGTCTTCCATCTGAAAAAGTACTGTTTGAAGATCGGTTACAACGATTGTCATTGAAAGCAATCAATGAGTTTTACAGGTTGCAATTTCTCGATGCCAGAGATGAGCAGGAAGTGGCTTTGTGCATTAAAGAGTTGAACTCTCCAGCCTTCCATCCAACCATGATCAGTCTGTGGATCACAGACGCTTTCGAGAGGACGGATTTGGAAAGGGATCTATTGGTCAAACTTGTTGTTAACCTCTCGACGGCTAACGATGGTATATTGAACCAAGCTCATCTTGTTAAAGGGTTTGAAGCAGTTCTTGACAATTTAGAAGATGCTTTAAATGATGCCCCAAGAGCTTCAGAATATTTGGGTCAAATTCTTGGGAAAGTGATCACAGAAAGCATGCTTTCTTTAAGAGAAGCGGCAGATTTGATCTGTCAAGGTGGAGAGGTACCTGGGAACCTTCTTCAATCTGGGCTTGGAGCCGATGTTCTTGGCAACATCTTGAAAACAATCAAAACAGAGAAAGGAGAGGGGTTCCTAACCGATCTGCTCACAAACTCGAATTTGCGGTTGGAGACGTTTCTGCCTCACGACCCTGTGAAATCAAGAGTGTTAGAGGAATTTATTTAG 876 42.69 MEEKDDLPAEGDLRIAPTASLNGYSSASALAILTSKEDLISRHTERFAGPTSMDHIRCPEHYSNYGNKDLRRSGQSFDRSRPILTPSLPSEKVLFEDRLQRLSLKAINEFYRLQFLDARDEQEVALCIKELNSPAFHPTMISLWITDAFERTDLERDLLVKLVVNLSTANDGILNQAHLVKGFEAVLDNLEDALNDAPRASEYLGQILGKVITESMLSLREAADLICQGGEVPGNLLQSGLGADVLGNILKTIKTEKGEGFLTDLLTNSNLRLETFLPHDPVKSRVLEEFI 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10144506 10147188 + MELO3C020378.2.1 Cme05g00800 327863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme05g00800 291 ProSiteProfiles MI domain profile. 98 227 IPR003891 -
Cme05g00800 291 SMART ma3_7 99 218 IPR003891 -
Cme05g00800 291 Gene3D - 92 291 - -
Cme05g00800 291 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 2 27 288 - -
Cme05g00800 291 SUPERFAMILY ARM repeat 96 288 IPR016024 -
Cme05g00800 291 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 27 288 IPR045208 GO:0003743
Cme05g00800 291 Pfam MA3 domain 117 217 IPR003891 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme05g00800 Cme-Chr5:10144506 Cme06g00346 Cme-Chr6:2143098 3.39E-60 dispersed
Cme05g00798 Cme-Chr5:10069097 Cme05g00800 Cme-Chr5:10144506 4.75E-157 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme05g00800 K03260 - cmo:103496916 455.292